ChromothripsisDB: a curated database of chromothripsis
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PubMed ID   24705251 Publish Date   2014 May Journal   Nature Genetics Species   Homo sapiens Disease Type   Glioma Technology   Next Generation Sequencing Case Number   15 Raw Data   Title   The genomic landscape of diffuse intrinsic pontine glioma and pediatric non-brainstem high-grade glioma Authors   Wu G, Diaz AK, Paugh BS, Rankin SL, Ju B, Li Y, Zhu X, Qu C, Chen X, Zhang J, Easton J, Edmonson M, Ma X, Lu C, Nagahawatte P, Hedlund E, Rusch M, Pounds S, Lin T, Onar-Thomas A, Huether R, Kriwacki R, Parker M, Gupta P, Becksfort J, Wei L, Mulder HL, Boggs K, Vadodaria B, Yergeau D, Russell JC, Ochoa K, Fulton RS, Fulton LL, Jones C, Boop FA, Broniscer A, Wetmore C, Gajjar A, Ding L, Mardis ER, Wilson RK, Taylor MR, Downing JR, Ellison DW, Zhang J, Baker SJ Affiliation   Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA Chromothripsis Definition   Close-by breakpoints: >=20 Copy number states: 2-6 Fragments random joining: Yes Download   Study Data File   Chromothripsis Cases   SJHGG003_A         Case ID: SJHGG003_A   Chromosome: 4   Disease type: Glioma   Technology: Next Generation Sequencing   Platform: Illumina Genome Analyzer IIx or HiSeq   Affected Gene: Gene List   Download: Copy Number File   Links File   SJHGG004_D         Case ID: SJHGG004_D   Chromosome: 15   Disease type: Glioma   Technology: Next Generation Sequencing   Platform: Illumina Genome Analyzer IIx or HiSeq   Affected Gene: Gene List   Download: Copy Number File   Links File   SJHGG007_A         Case ID: SJHGG007_A   Chromosome: X   Disease type: Glioma   Technology: Next Generation Sequencing   Platform: Illumina Genome Analyzer IIx or HiSeq   Affected Gene: Gene List   Download: Copy Number File   Links File   SJHGG009_A         Case ID: SJHGG009_A   Chromosome: 7   Disease type: Glioma   Technology: Next Generation Sequencing   Platform: Illumina Genome Analyzer IIx or HiSeq   Affected Gene: Gene List   Download: Copy Number File   Links File   SJHGG011_D         Case ID: SJHGG011_D   Chromosome: 4   Disease type: Glioma   Technology: Next Generation Sequencing   Platform: Illumina Genome Analyzer IIx or HiSeq   Download: Copy Number File   Links File   SJHGG017_D         Case ID: SJHGG017_D   Chromosome: 19   Disease type: Glioma   Technology: Next Generation Sequencing   Platform: Illumina Genome Analyzer IIx or HiSeq   Affected Gene: Gene List   Download: Copy Number File   Links File   SJHGG019_E         Case ID: SJHGG019_E   Chromosome: 7   Disease type: Glioma   Technology: Next Generation Sequencing   Platform: Illumina Genome Analyzer IIx or HiSeq   Affected Gene: Gene List   Download: Copy Number File   Links File   SJHGG019_S         Case ID: SJHGG019_S   Chromosome: 8   Disease type: Glioma   Technology: Next Generation Sequencing   Platform: Illumina Genome Analyzer IIx or HiSeq   Affected Gene: Gene List   Download: Copy Number File   Links File   SJHGG033_D         Case ID: SJHGG033_D   Chromosome: 11   Disease type: Glioma   Technology: Next Generation Sequencing   Platform: Illumina Genome Analyzer IIx or HiSeq   Affected Gene: Gene List   Download: Copy Number File   Links File   SJHGG033_R         Case ID: SJHGG033_R   Chromosome: 11   Disease type: Glioma   Technology: Next Generation Sequencing   Platform: Illumina Genome Analyzer IIx or HiSeq   Affected Gene: Gene List   Download: Copy Number File   Links File   SJHGG044_D         Case ID: SJHGG044_D   Chromosome: 11   Disease type: Glioma   Technology: Next Generation Sequencing   Platform: Illumina Genome Analyzer IIx or HiSeq   Affected Gene: Gene List   Download: Copy Number File   Links File   SJHGG052_A         Case ID: SJHGG052_A   Chromosome: 1   Disease type: Glioma   Technology: Next Generation Sequencing   Platform: Illumina Genome Analyzer IIx or HiSeq   Affected Gene: Gene List   Download: Copy Number File   Links File   SJHGG075_A         Case ID: SJHGG075_A   Chromosome: 4   Disease type: Glioma   Technology: Next Generation Sequencing   Platform: Illumina Genome Analyzer IIx or HiSeq   Affected Gene: Gene List   Download: Copy Number File   Links File   SJHGG078_A         Case ID: SJHGG078_A   Chromosome: 4   Disease type: Glioma   Technology: Next Generation Sequencing   Platform: Illumina Genome Analyzer IIx or HiSeq   Affected Gene: Gene List   Download: Copy Number File   Links File   SJHGG102_D         Case ID: SJHGG102_D   Chromosome: 8   Disease type: Glioma   Technology: Next Generation Sequencing   Platform: Illumina Genome Analyzer IIx or HiSeq   Affected Gene: Gene List   Download: Copy Number File   Links File top

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