ChromothripsisDB: a curated database of chromothripsis
 
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  Fusion Gene
  PubMed ID: 24705251 Case ID: SJHGG003_A Disease: Glioma Genome Assembly: GRCh37/hg19
Gene Symbol 1 Chromosome1 Description 1 Gene Symbol 2 Chromosome2 Description 2
DIP2C 10 DIP2 disco-interacting protein 2 homolog C (Drosophila) PDGFRA 4 platelet-derived growth factor receptor, alpha polypeptide
 
 
  Affected Gene
  PubMed ID: 24705251 Case ID: SJHGG003_A Disease: Glioma Genome Assembly: GRCh37/hg19
Gene Symbol Entrez Gene Chromosome Start End Description
ABLIM2 84448 4 7967039 8160559 actin binding LIM protein family, member 2
ACOX3 8310 4 8368009 8442450 acyl-CoA oxidase 3, pristanoyl
AFAP1 60312 4 7760441 7941653 actin filament associated protein 1
AFF1 4299 4 87856154 88062206 AF4/FMR2 family, member 1
ARAP2 116984 4 35949843 36246131 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
ARL9 132946 4 57371509 57390614 ADP-ribosylation factor-like 9
C1orf101 257044 1 244617679 244804479 chromosome 1 open reading frame 101
C8orf76 84933 8 124232196 124253638 chromosome 8 open reading frame 76
CCKAR 886 4 26483022 26492084 cholecystokinin A receptor
CHIC2 26511 4 54875956 54930857 cysteine-rich hydrophobic domain 2
CLNK 116449 4 10488019 10686489 cytokine-dependent hematopoietic cell linker
DCAF16 54876 4 17802278 17812381 DDB1 and CUL4 associated factor 16
DEFB131 644414 4 9446260 9452240 defensin, beta 131
DRD5 1816 4 9783258 9785632 dopamine receptor D5
DTHD1 401124 4 36283244 36347378 death domain containing 1
DUX4 100288687 4 191005267 191007077 double homeobox 4
EPHA5 2044 4 66185281 66536213 EPH receptor A5
FAM184B 27146 4 17630929 17783135 family with sequence similarity 184, member B
FIP1L1 81608 4 54243810 55161439 factor interacting with PAPOLA and CPSF1
GBA3 57733 4 22694537 22821198 glucosidase, beta, acid 3 (gene/pseudogene)
GPR125 166647 4 22346694 22517677 G protein-coupled receptor 125
GPR78 27201 4 8560452 8621486 G protein-coupled receptor 78
GRPEL1 80273 4 7060633 7069924 GrpE-like 1, mitochondrial (E. coli)
GSX2 170825 4 54965690 54968672 GS homeobox 2
HOPX 84525 4 57514155 57548065 HOP homeobox
HS3ST1 9957 4 11394774 11431389 heparan sulfate (glucosamine) 3-O-sulfotransferase 1
HTRA3 94031 4 8271492 8308838 HtrA serine peptidase 3
IGFBP7 3490 4 57896939 57976551 insulin-like growth factor binding protein 7
LCORL 254251 4 17842822 18023499 ligand dependent nuclear receptor corepressor-like
LNX1 84708 4 54325468 54567572 ligand of numb-protein X 1, E3 ubiquitin protein ligase
LPHN3 23284 4 62066976 62944053 latrophilin 3
MED28 80306 4 17616254 17635728 mediator complex subunit 28
NCAPG 64151 4 17812525 17846485 non-SMC condensin I complex, subunit G
NKX3-2 579 4 13542454 13546674 NK3 homeobox 2
PACRGL 133015 4 20697905 20754530 PARK2 co-regulated-like
PAICS 10606 4 57301907 57327534 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase
PCDH7 5099 4 30722037 31148422 protocadherin 7
PDGFRA 5156 4 55095264 55164414 platelet-derived growth factor receptor, alpha polypeptide
POLR2B 5431 4 57843888 57897334 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
PPAT 5471 4 57259528 57301781 phosphoribosyl pyrophosphate amidotransferase
PSAPL1 768239 4 7432022 7436700 prosaposin-like 1 (gene/pseudogene)
RAB28 9364 4 13362978 13485989 RAB28, member RAS oncogene family
RASL11B 65997 4 53728457 53733000 RAS-like, family 11, member B
RBPJ 3516 4 26165077 26436541 recombination signal binding protein for immunoglobulin kappa J region
REST 5978 4 57774075 57802010 RE1-silencing transcription factor
SCFD2 152579 4 53739149 54232242 sec1 family domain containing 2
SH3TC1 54436 4 8183799 8243530 SH3 domain and tetratricopeptide repeats 1
SLC2A9 56606 4 9772777 10056560 solute carrier family 2 (facilitated glucose transporter), member 9
SORCS2 57537 4 7194265 7744554 sortilin-related VPS10 domain containing receptor 2
SRP72 6731 4 57333081 57369839 signal recognition particle 72kDa
STAP1 26228 4 68424446 68473055 signal transducing adaptor family member 1
STIM2 57620 4 26859300 27027003 stromal interaction molecule 2
TBC1D19 55296 4 26578059 26756973 TBC1 domain family, member 19
TECRL 253017 4 65140975 65275186 trans-2,3-enoyl-CoA reductase-like
TMPRSS11B 132724 4 69092371 69111438 transmembrane protease, serine 11B
UBA6 55236 4 68478370 68566897 ubiquitin-like modifier activating enzyme 6
UGT2A3 79799 4 69794181 69817509 UDP glucuronosyltransferase 2 family, polypeptide A3
UGT2B10 7365 4 69681711 69696914 UDP glucuronosyltransferase 2 family, polypeptide B10
UGT2B11 10720 4 70065669 70080449 UDP glucuronosyltransferase 2 family, polypeptide B11
UGT2B15 7366 4 69512348 69536346 UDP glucuronosyltransferase 2 family, polypeptide B15
UGT2B17 7367 4 69402902 69434245 UDP glucuronosyltransferase 2 family, polypeptide B17
UGT2B7 7364 4 69917081 69978705 UDP glucuronosyltransferase 2 family, polypeptide B7
WDR1 9948 4 10075963 10118573 WD repeat domain 1
YTHDC1 91746 4 69176105 69215807 YTH domain containing 1
ZNF518B 85460 4 10441498 10459034 zinc finger protein 518B
ZNF595 152687 4 53179 88099 zinc finger protein 595
ZNF718 255403 4 124386 157779 zinc finger protein 718
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Chromothripsis database. 2025 Cai Laboratory