| PubMed ID |
|
24462510 |
Publish Date |
|
2014 Jan |
| Journal |
|
Genomics |
Species |
|
Homo sapiens |
| Disease Type |
|
Hepatocellular carcinoma |
Technology |
|
Next Generation Sequencing |
| Case Number |
|
5 |
Raw Data |
|
GEO: GSE25097 EBI: ERP001196 |
| Title |
|
Decoding complex patterns of genomic rearrangement in hepatocellular carcinoma |
| Authors |
|
Julio Fernandez-Banet, Nikki P. Lee, Kin Tak Chan, Huan Gao, Xiao Liu, Wing-Kin Sung,Winnie Tan, Sheung Tat Fan, Ronnie T. Poon, Shiyong Li, Keith Ching, Paul A. Rejto, Mao Mao, Zhengyan Kan |
| Affiliation |
|
Pfizer Oncology, San Diego, CA, USA |
| Chromothripsis Definition |
|
Close-by breakpoints: >=30
Copy number states: 3
Fragments random joining: Yes |
| Download |
|
Study Data File |
| |
| Chromothripsis Cases |
| 117T |
| |
|
|
| |
Case ID: |
117T |
| |
Chromosome: | 1 |
| |
Disease type: |
Hepatocellular carcinoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HiSeq 2000 |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | 206T |
| |
|
|
| |
Case ID: |
206T |
| |
Chromosome: | 1 |
| |
Disease type: |
Hepatocellular carcinoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HiSeq 2000 |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | 39T |
| |
|
|
| |
Case ID: |
39T |
| |
Chromosome: | 6,8,13 |
| |
Disease type: |
Hepatocellular carcinoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HiSeq 2000 |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | 64T |
| |
|
|
| |
Case ID: |
64T |
| |
Chromosome: | 4,8 |
| |
Disease type: |
Hepatocellular carcinoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HiSeq 2000 |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | 172T |
| |
|
|
| |
Case ID: |
172T |
| |
Chromosome: | 5,6,8 |
| |
Disease type: |
Hepatocellular carcinoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HiSeq 2000 |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | top |
|
