ChromothripsisDB: a curated database of chromothripsis
 
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  Fusion Gene
  PubMed ID: 24462510 Case ID: 39T Disease: Hepatocellular carcinoma Genome Assembly: GRCh37/hg19
Gene Symbol 1 Chromosome1 Description 1 Gene Symbol 2 Chromosome2 Description 2
NUDCD1 8 NudC domain containing 1 RIMS2 8 regulating synaptic membrane exocytosis 2
SUPT3H 6 suppressor of Ty 3 homolog (S. cerevisiae) DAAM2 6 dishevelled associated activator of morphogenesis 2
XDH 2 xanthine dehydrogenase SLC8A1 2 solute carrier family 8 (sodium/calcium exchanger), member 1
 
 
  Affected Gene
  PubMed ID: 24462510 Case ID: 39T Disease: Hepatocellular carcinoma Genome Assembly: GRCh37/hg19
Gene Symbol Entrez Gene Chromosome Start End Description
BCKDHB 594 6 80816364 81055987 branched chain keto acid dehydrogenase E1, beta polypeptide
CCND3 896 6 41902671 42018095 cyclin D3
CDK8 1024 13 26828276 26979375 cyclin-dependent kinase 8
CFH 3075 1 196621008 196716634 complement factor H
CLIC5 53405 6 45868045 46048132 chloride intracellular channel 5
CSMD1 64478 8 2792875 4852494 CUB and Sushi multiple domains 1
CSMD3 114788 8 113235157 114449328 CUB and Sushi multiple domains 3
CYP39A1 51302 6 46517541 46620523 cytochrome P450, family 39, subfamily A, polypeptide 1
DAAM2 23500 6 39760142 39872648 dishevelled associated activator of morphogenesis 2
DENND3 22898 8 142127377 142205907 DENN/MADD domain containing 3
FECH 2235 18 55215515 55254004 ferrochelatase
FKBP5 2289 6 35541362 35696360 FK506 binding protein 5
HNRNPA2B1 3181 7 26229547 26241149 heterogeneous nuclear ribonucleoprotein A2/B1
KIAA1377 57562 11 101785746 101871789 KIAA1377
LRP12 29967 8 105501459 105601252 low density lipoprotein receptor-related protein 12
MIPEP 4285 13 24304328 24463558 mitochondrial intermediate peptidase
MSRA 4482 8 9911778 10286401 methionine sulfoxide reductase A
NDFIP2 54602 13 80055287 80130210 Nedd4 family interacting protein 2
NUDCD1 84955 8 110253148 110346614 NudC domain containing 1
OR2L13 284521 1 248100493 248264224 olfactory receptor, family 2, subfamily L, member 13
PCDH11Y 83259 Y 5000226 5742228 protocadherin 11 Y-linked
PCDH9 5101 13 66876967 67804468 protocadherin 9
PDE1A 5136 2 183004763 183387919 phosphodiesterase 1A, calmodulin-dependent
PLCG2 5336 16 81772702 81991899 phospholipase C, gamma 2 (phosphatidylinositol-specific)
PPP2R5D 5528 6 42952237 42980080 protein phosphatase 2, regulatory subunit B', delta
RBM26 64062 13 79885962 79980612 RNA binding motif protein 26
RIMS2 9699 8 104512976 105268322 regulating synaptic membrane exocytosis 2
SACS 26278 13 23902965 24007841 sacsin molecular chaperone
SLC8A1 6546 2 40324410 40838193 solute carrier family 8 (sodium/calcium exchanger), member 1
SOX5 6660 12 23682440 24103966 SRY (sex determining region Y)-box 5
SRPK1 6732 6 35800743 35889119 SRSF protein kinase 1
STX8 9482 17 9153788 9479908 syntaxin 8
SUPT3H 8464 6 44777054 45345690 suppressor of Ty 3 homolog (S. cerevisiae)
VPS13D 55187 1 12290124 12572099 vacuolar protein sorting 13 homolog D (S. cerevisiae)
XDH 7498 2 31557187 31637581 xanthine dehydrogenase
ZFAND3 60685 6 37787275 38122400 zinc finger, AN1-type domain 3
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© 2015 Cai Laboratory.  Last updated on 13 Mar 2018