| PubMed ID |
|
24553141 |
Publish Date |
|
2014 Feb |
| Journal |
|
Nature |
Species |
|
Homo sapiens |
| Disease Type |
|
Ependymoma |
Technology |
|
Next Generation Sequencing |
| Case Number |
|
9 |
Raw Data |
|
EBI: EGAS00001000254 |
| Title |
|
C11orf95-RELA fusions drive oncogenic NF-kappaB signalling in ependymoma. |
| Authors |
|
Parker M, Mohankumar KM, Punchihewa C, Weinlich R, Dalton JD, Li Y, Lee R, Tatevossian RG, Phoenix TN, Thiruvenkatam R, White E, Tang B, Orisme W, Gupta K, Rusch M, Chen X, Li Y, Nagahawhatte P, Hedlund E, Finkelstein D, Wu G, Shurtleff S, Easton J, Boggs |
| Affiliation |
|
St. Jude Children's Research Hospital - Washington University Pediatric Cancer Genome Project, Memphis, Tennessee 38105, USA |
| Chromothripsis Definition |
|
Close-by breakpoints: >=4
Copy number states: 2-3
Fragments random joining: Yes |
| Download |
|
Study Data File |
| |
| Chromothripsis Cases |
| ST1 |
| |
|
|
| |
Case ID: |
ST1 |
| |
Chromosome: | 11,X |
| |
Disease type: |
Ependymoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HighSeq |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | ST2 |
| |
|
|
| |
Case ID: |
ST2 |
| |
Chromosome: | 1,11 |
| |
Disease type: |
Ependymoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HighSeq |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | ST3 |
| |
|
|
| |
Case ID: |
ST3 |
| |
Chromosome: | 11 |
| |
Disease type: |
Ependymoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HighSeq |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | ST4 |
| |
|
|
| |
Case ID: |
ST4 |
| |
Chromosome: | 2,11 |
| |
Disease type: |
Ependymoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HighSeq |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | ST5 |
| |
|
|
| |
Case ID: |
ST5 |
| |
Chromosome: | 6,8,11 |
| |
Disease type: |
Ependymoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HighSeq |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | ST6 |
| |
|
|
| |
Case ID: |
ST6 |
| |
Chromosome: | 11 |
| |
Disease type: |
Ependymoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HighSeq |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | ST7 |
| |
|
|
| |
Case ID: |
ST7 |
| |
Chromosome: | 6,11 |
| |
Disease type: |
Ependymoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HighSeq |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | ST8 |
| |
|
|
| |
Case ID: |
ST8 |
| |
Chromosome: | 11 |
| |
Disease type: |
Ependymoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HighSeq |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | ST16 |
| |
|
|
| |
Case ID: |
ST16 |
| |
Chromosome: | 4,11 |
| |
Disease type: |
Ependymoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HighSeq |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | top |
|
