ChromothripsisDB: a curated database of chromothripsis
 
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  Fusion Gene
  PubMed ID: 24553141 Case ID: ST3 Disease: Ependymoma Genome Assembly: GRCh37/hg19
Gene Symbol 1 Chromosome1 Description 1 Gene Symbol 2 Chromosome2 Description 2
C1orf95 1 chromosome 1 open reading frame 95 RELA 11 v-rel avian reticuloendotheliosis viral oncogene homolog A
 
 
  Affected Gene
  PubMed ID: 24553141 Case ID: ST3 Disease: Ependymoma Genome Assembly: GRCh37/hg19
Gene Symbol Entrez Gene Chromosome Start End Description
CASP2 835 7 142985308 143004789 caspase 2, apoptosis-related cysteine peptidase
MYO9A 4649 15 72114632 72410918 myosin IXA
CTSC 1075 11 88026760 88070955 cathepsin C
CEP57 9702 11 95523129 95565857 centrosomal protein 57kDa
CALCRL 10203 2 188207856 188313187 calcitonin receptor-like
DDX43 55510 6 74104471 74127292 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
MFRP 83552 11 119209652 119217383 membrane frizzled-related protein
OPCML 4978 11 132284871 133402414 opioid binding protein/cell adhesion molecule-like
KIRREL3 84623 11 126293254 126873355 kin of IRRE like 3 (Drosophila)
CDC42EP2 10435 11 65082289 65089900 CDC42 effector protein (Rho GTPase binding) 2
PDE4D 5144 5 58264865 59817947 phosphodiesterase 4D, cAMP-specific
KCNMA1 3778 10 78629359 79398353 potassium channel, calcium activated large conductance subfamily M alpha, member 1
CLPB 81570 11 72003469 72145692 ClpB caseinolytic peptidase B homolog (E. coli)
C1QTNF5 114902 11 119209652 119217383 C1q and tumor necrosis factor related protein 5
PPP1CB 5500 2 28974506 29025806 protein phosphatase 1, catalytic subunit, beta isozyme
MBD6 114785 12 57914493 57923931 methyl-CpG binding domain protein 6
POLR2G 5436 11 62529016 62534182 polymerase (RNA) II (DNA directed) polypeptide G
LIPF 8513 10 90424198 90438571 lipase, gastric
SNX15 29907 11 64794880 64808044 sorting nexin 15
MS4A6E 245802 11 60102304 60164069 membrane-spanning 4-domains, subfamily A, member 6E
NCK2 8440 2 106361354 106510730 NCK adaptor protein 2
PSMD9 5715 12 122326637 122356203 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
CUL5 8065 11 107879459 107978503 cullin 5
CADM2 253559 3 85008132 86123579 cell adhesion molecule 2
SIK2 23235 11 111473115 111601577 salt-inducible kinase 2
DLG2 1740 11 83166055 85338966 discs, large homolog 2 (Drosophila)
SESN3 143686 11 94898704 94965705 sestrin 3
EHD1 10938 11 64619114 64655768 EH-domain containing 1
MITF 4286 3 69788586 70017488 microphthalmia-associated transcription factor
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Chromothripsis database. 2025 Cai Laboratory