| PubMed ID |
|
22014273 |
Publish Date |
|
2011 Oct |
| Journal |
|
Genome Biol |
Species |
|
Homo sapiens |
| Disease Type |
|
Colorectal cancer |
Technology |
|
Next Generation Sequencing |
| Case Number |
|
6 |
Raw Data |
|
GEO: GSE32711 EBI: ERP000875 |
| Title |
|
Chromothripsis is a common mechanism driving genomic rearrangements in primary and metastatic colorectal cancer |
| Authors |
|
Kloosterman WP, Hoogstraat M, Paling O, Tavakoli-Yaraki M, Renkens I, Vermaat JS, van Roosmalen MJ, van Lieshout S, Nijman IJ, Roessingh W, van 't Slot R, van de Belt J, Guryev V, Koudijs M, Voest E, Cuppen E |
| Affiliation |
|
Department of Medical Genetics, University Medical Center Utrecht, Universiteitsweg 100, Utrecht, 3584 CG, The Netherlands |
| Chromothripsis Definition |
|
Close-by breakpoints: >=5
Copy number states: 2-3
Fragments random joining: Yes |
| Download |
|
Study Data File |
| |
| Chromothripsis Cases |
| Patient1_primary |
| |
|
|
| |
Case ID: |
Patient1_primary |
| |
Chromosome: | 13 |
| |
Disease type: |
Colorectal cancer |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
AB SOLiD 4 System |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | Patient1_metastasis |
| |
|
|
| |
Case ID: |
Patient1_metastasis |
| |
Chromosome: | 13 |
| |
Disease type: |
Colorectal cancer |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
AB SOLiD 4 System |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | Patient3_primary |
| |
|
|
| |
Case ID: |
Patient3_primary |
| |
Chromosome: | 15,20 |
| |
Disease type: |
Colorectal cancer |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
AB SOLiD 4 System |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | Patient3_metastasis |
| |
|
|
| |
Case ID: |
Patient3_metastasis |
| |
Chromosome: | 1 |
| |
Disease type: |
Colorectal cancer |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
AB SOLiD 4 System |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | Patient4_primary |
| |
|
|
| |
Case ID: |
Patient4_primary |
| |
Chromosome: | 3,6,8 |
| |
Disease type: |
Colorectal cancer |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
AB SOLiD 4 System |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | Patient4_metastasis |
| |
|
|
| |
Case ID: |
Patient4_metastasis |
| |
Chromosome: | 8,17,21 |
| |
Disease type: |
Colorectal cancer |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
AB SOLiD 4 System |
| |
Affected Gene: |
Gene List |
| |
Download: |
Copy Number File Links File |
|  |  | | top |
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