CTLPScanner: A Web Server for Chromothripsis-like Pattern Detection
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Data input
Example Queries
GSM681798. Multiple myeloma. Chromosome 1 and 3 pulverization. Show detected chromothripsis region only.
GSM182925. Breast cancer. Chromosome 14 pulverization.
GSM681811. Multiple myeloma. Chromosome 8 and 18 pulverization.
Download zip file for GSM638970 and GSM681810. Multiple Chromosomes pulverization.
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Scanner parameters & thresholds
Genome assembly:
GRCh38/hg38
GRCh37/hg19
NCBI36/hg18
NCBI35/hg17
NCBI34/hg16
Copy number status change times ≥
Log10 of likelihood ratio ≥
Minimum segment size (Kb):
Signal distance between adjacent segments:
Visualization options
Signal value for genomic gains ≥
Color for genomic gains:
Red
Yellow
Green
Blue
Signal value for genomic losses ≤
Color for genomic losses:
Red
Yellow
Green
Blue
Show detected chromothripsis-like region only
