| PubMed ID |
|
23699601 |
Publish Date |
|
2013 Aug |
| Journal |
|
Blood |
Species |
|
Homo sapiens |
| Disease Type |
|
Diffuse large B-cell lymphoma |
Technology |
|
Next Generation Sequencing |
| Case Number |
|
10 |
Raw Data |
|
dbGaP: phs000532 |
| Title |
|
Mutational and structural analysis of diffuse large B-cell lymphoma using whole-genome sequencing |
| Authors |
|
Ryan D. Morin, Karen Mungall, Erin Pleasance, Andrew J. Mungall, Rodrigo Goya, Ryan D. Huff, David W. Scott, Jiarui Ding, Andrew Roth, Readman Chiu, Richard D. Corbett, Fong Chun Chan, Maria Mendez-Lago, Diane L. Trinh, Madison Bolger-Munro, Greg Taylor, Alireza Hadj Khodabakhshi, Susana Ben-Neriah, Julia Pon, Barbara Meissner, Bruce Woolcock, Noushin Farnoud, Sanja Rogic, Emilia L. Lim, Nathalie A. Johnson, Sohrab Shah, Steven Jones, Christian Steidl, Robert Holt, Inanc Birol, Richard Moore, Joseph M. Connors, Randy D. Gascoyne, Marco A. Marra |
| Affiliation |
|
Genome Sciences Centre, BC Cancer Agency, Vancouver, Canada |
| Chromothripsis Definition |
|
Close-by breakpoints: >=6
Copy number states: 3
Fragments random joining: NA |
| Download |
|
Study Data File |
| |
| Chromothripsis Cases |
| RG014 |
| |
|
|
| |
Case ID: |
RG014 |
| |
Chromosome: | 2 |
| |
Disease type: |
Diffuse large B-cell lymphoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HiSeq 2000 |
| |
Download: |
Copy Number File Links File |
|  |  | | RG028 |
| |
|
|
| |
Case ID: |
RG028 |
| |
Chromosome: | 1,2,9,17 |
| |
Disease type: |
Diffuse large B-cell lymphoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HiSeq 2000 |
| |
Download: |
Copy Number File Links File |
|  |  | | RG034 |
| |
|
|
| |
Case ID: |
RG034 |
| |
Chromosome: | 6,9,13,15,18 |
| |
Disease type: |
Diffuse large B-cell lymphoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HiSeq 2000 |
| |
Download: |
Copy Number File Links File |
|  |  | | RG043 |
| |
|
|
| |
Case ID: |
RG043 |
| |
Chromosome: | 1 |
| |
Disease type: |
Diffuse large B-cell lymphoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HiSeq 2000 |
| |
Download: |
Copy Number File Links File |
|  |  | | RG065 |
| |
|
|
| |
Case ID: |
RG065 |
| |
Chromosome: | 6,8,12,15 |
| |
Disease type: |
Diffuse large B-cell lymphoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HiSeq 2000 |
| |
Download: |
Copy Number File Links File |
|  |  | | RG074 |
| |
|
|
| |
Case ID: |
RG074 |
| |
Chromosome: | 1,7 |
| |
Disease type: |
Diffuse large B-cell lymphoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HiSeq 2000 |
| |
Download: |
Copy Number File Links File |
|  |  | | RG081 |
| |
|
|
| |
Case ID: |
RG081 |
| |
Chromosome: | 1,4,11,12 |
| |
Disease type: |
Diffuse large B-cell lymphoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HiSeq 2000 |
| |
Download: |
Copy Number File Links File |
|  |  | | RG116 |
| |
|
|
| |
Case ID: |
RG116 |
| |
Chromosome: | 2,8 |
| |
Disease type: |
Diffuse large B-cell lymphoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HiSeq 2000 |
| |
Download: |
Copy Number File Links File |
|  |  | | RG132 |
| |
|
|
| |
Case ID: |
RG132 |
| |
Chromosome: | 2,6,8,16,17,X |
| |
Disease type: |
Diffuse large B-cell lymphoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HiSeq 2000 |
| |
Download: |
Copy Number File Links File |
|  |  | | RG138 |
| |
|
|
| |
Case ID: |
RG138 |
| |
Chromosome: | 8,11,18 |
| |
Disease type: |
Diffuse large B-cell lymphoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina HiSeq 2000 |
| |
Download: |
Copy Number File Links File |
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