ChromothripsisDB: a curated database of chromothripsis
 
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PubMed ID   23699601 Publish Date   2013 Aug
Journal   Blood Species   Homo sapiens
Disease Type   Diffuse large B-cell lymphoma Technology   Next Generation Sequencing
Case Number   10 Raw Data   dbGaP: phs000532  
Title   Mutational and structural analysis of diffuse large B-cell lymphoma using whole-genome sequencing
Authors   Ryan D. Morin, Karen Mungall, Erin Pleasance, Andrew J. Mungall, Rodrigo Goya, Ryan D. Huff, David W. Scott, Jiarui Ding, Andrew Roth, Readman Chiu, Richard D. Corbett, Fong Chun Chan, Maria Mendez-Lago, Diane L. Trinh, Madison Bolger-Munro, Greg Taylor, Alireza Hadj Khodabakhshi, Susana Ben-Neriah, Julia Pon, Barbara Meissner, Bruce Woolcock, Noushin Farnoud, Sanja Rogic, Emilia L. Lim, Nathalie A. Johnson, Sohrab Shah, Steven Jones, Christian Steidl, Robert Holt, Inanc Birol, Richard Moore, Joseph M. Connors, Randy D. Gascoyne, Marco A. Marra
Affiliation   Genome Sciences Centre, BC Cancer Agency, Vancouver, Canada
Chromothripsis Definition   Close-by breakpoints: >=6
Copy number states: 3
Fragments random joining: NA
Download   Study Data File
 
Chromothripsis Cases
  RG014
     
  Case ID: RG014
  Chromosome:2
  Disease type: Diffuse large B-cell lymphoma
  Technology: Next Generation Sequencing
  Platform: Illumina HiSeq 2000
  Download: Copy Number File   Links File
  RG028
     
  Case ID: RG028
  Chromosome:1,2,9,17
  Disease type: Diffuse large B-cell lymphoma
  Technology: Next Generation Sequencing
  Platform: Illumina HiSeq 2000
  Download: Copy Number File   Links File
  RG034
     
  Case ID: RG034
  Chromosome:6,9,13,15,18
  Disease type: Diffuse large B-cell lymphoma
  Technology: Next Generation Sequencing
  Platform: Illumina HiSeq 2000
  Download: Copy Number File   Links File
  RG043
     
  Case ID: RG043
  Chromosome:1
  Disease type: Diffuse large B-cell lymphoma
  Technology: Next Generation Sequencing
  Platform: Illumina HiSeq 2000
  Download: Copy Number File   Links File
  RG065
     
  Case ID: RG065
  Chromosome:6,8,12,15
  Disease type: Diffuse large B-cell lymphoma
  Technology: Next Generation Sequencing
  Platform: Illumina HiSeq 2000
  Download: Copy Number File   Links File
  RG074
     
  Case ID: RG074
  Chromosome:1,7
  Disease type: Diffuse large B-cell lymphoma
  Technology: Next Generation Sequencing
  Platform: Illumina HiSeq 2000
  Download: Copy Number File   Links File
  RG081
     
  Case ID: RG081
  Chromosome:1,4,11,12
  Disease type: Diffuse large B-cell lymphoma
  Technology: Next Generation Sequencing
  Platform: Illumina HiSeq 2000
  Download: Copy Number File   Links File
  RG116
     
  Case ID: RG116
  Chromosome:2,8
  Disease type: Diffuse large B-cell lymphoma
  Technology: Next Generation Sequencing
  Platform: Illumina HiSeq 2000
  Download: Copy Number File   Links File
  RG132
     
  Case ID: RG132
  Chromosome:2,6,8,16,17,X
  Disease type: Diffuse large B-cell lymphoma
  Technology: Next Generation Sequencing
  Platform: Illumina HiSeq 2000
  Download: Copy Number File   Links File
  RG138
     
  Case ID: RG138
  Chromosome:8,11,18
  Disease type: Diffuse large B-cell lymphoma
  Technology: Next Generation Sequencing
  Platform: Illumina HiSeq 2000
  Download: Copy Number File   Links File
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