| PubMed ID |
|
21215367 |
Publish Date |
|
2011 Jan |
| Journal |
|
Cell |
Species |
|
Homo sapiens |
| Disease Type |
|
Osteosarcoma |
Technology |
|
Next Generation Sequencing |
| Case Number |
|
15 |
Raw Data |
|
|
| Title |
|
Massive Genomic Rearrangement Acquired in a Single Catastrophic Event during Cancer Development |
| Authors |
|
Stephens PJ, Greenman CD, Fu B, Yang F, Bignell GR, Mudie LJ, Pleasance ED, Lau KW, Beare D, Stebbings LA, McLaren S, Lin ML, McBride DJ, Varela I, Nik-Zainal S, Leroy C, Jia M, Menzies A, Butler AP, Teague JW, Quail MA, Burton J, Swerdlow H, Carter NP, M |
| Affiliation |
|
Cancer Genome Project, Wellcome Trust Sanger Institute, Hinxton, Cambridge CB10 1SA, UK |
| Chromothripsis Definition |
|
Close-by breakpoints: >=50
Copy number states: 2-3
Fragments random joining: Yes |
| Download |
|
Study Data File |
| |
| Chromothripsis Cases |
| PD3172a |
| |
|
|
| |
Case ID: |
PD3172a |
| |
Chromosome: | 1,4,12,13,15 |
| |
Disease type: |
Chronic lymphocytic leukemia |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina Genome Analyzer II |
| |
Affected Gene: |
Gene List |
| |
Download: |
Links File |
| |  | | PD3175a |
| |
|
|
| |
Case ID: |
PD3175a |
| |
Chromosome: | 4,9,13 |
| |
Disease type: |
Chronic lymphocytic leukemia |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina Genome Analyzer II |
| |
Affected Gene: |
Gene List |
| |
Download: |
Links File |
| |  | | TK10 |
| |
|
|
| |
Case ID: |
TK10 |
| |
Chromosome: | 5 |
| |
Disease type: |
Renal cancer |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina Genome Analyzer II |
| |
Affected Gene: |
Gene List |
| |
Download: |
Links File |
| |  | | PD3808a |
| |
|
|
| |
Case ID: |
PD3808a |
| |
Chromosome: | 3,4,7,8,9 |
| |
Disease type: |
Chordoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina Genome Analyzer II |
| |
Affected Gene: |
Gene List |
| |
Download: |
Links File |
| |  | | PD3807a |
| |
|
|
| |
Case ID: |
PD3807a |
| |
Chromosome: | 1,3,8,14 |
| |
Disease type: |
Chordoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina Genome Analyzer II |
| |
Affected Gene: |
Gene List |
| |
Download: |
Links File |
| |  | | SCLC-21H |
| |
|
|
| |
Case ID: |
SCLC-21H |
| |
Chromosome: | 8 |
| |
Disease type: |
Small cell lung cancer |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina Genome Analyzer II |
| |
Affected Gene: |
Gene List |
| |
Download: |
Links File |
| |  | | SNU-C1 |
| |
|
|
| |
Case ID: |
SNU-C1 |
| |
Chromosome: | 15 |
| |
Disease type: |
Colorectal cancer |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina Genome Analyzer II |
| |
Affected Gene: |
Gene List |
| |
Download: |
Links File |
| |  | | 8505C |
| |
|
|
| |
Case ID: |
8505C |
| |
Chromosome: | 9 |
| |
Disease type: |
Thyroid cancer |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina Genome Analyzer II |
| |
Affected Gene: |
Gene List |
| |
Download: |
Links File |
| |  | | SW982 |
| |
|
|
| |
Case ID: |
SW982 |
| |
Chromosome: | 1 |
| |
Disease type: |
Synovial sarcoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina Genome Analyzer II |
| | | SC32 |
| |
|
|
| |
Case ID: |
SC32 |
| |
Chromosome: | 11 |
| |
Disease type: |
Melanoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina Genome Analyzer II |
| | | A172 |
| |
|
|
| |
Case ID: |
A172 |
| |
Chromosome: | 16 |
| |
Disease type: |
Glioblastoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina Genome Analyzer II |
| | | PD3646a |
| |
|
|
| |
Case ID: |
PD3646a |
| |
Chromosome: | 1,4,10,14 |
| |
Disease type: |
Pancreatic cancer |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina Genome Analyzer II |
| | | PD3799a |
| |
|
|
| |
Case ID: |
PD3799a |
| |
Chromosome: | 12,20 |
| |
Disease type: |
Osteosarcoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina Genome Analyzer II |
| |
Affected Gene: |
Gene List |
| |
Download: |
Links File |
| |  | | PD3786a |
| |
|
|
| |
Case ID: |
PD3786a |
| |
Chromosome: | 8,12,14 |
| |
Disease type: |
Osteosarcoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina Genome Analyzer II |
| |
Affected Gene: |
Gene List |
| |
Download: |
Links File |
| |  | | PD3791a |
| |
|
|
| |
Case ID: |
PD3791a |
| |
Chromosome: | 7,9,12,13 |
| |
Disease type: |
Osteosarcoma |
| |
Technology: |
Next Generation Sequencing |
| |
Platform: |
Illumina Genome Analyzer II |
| |
Affected Gene: |
Gene List |
| |
Download: |
Links File |
| |  | | top |
|
