ChromothripsisDB: a curated database of chromothripsis
 
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  Study
PubMed ID   28260531 Publish Date   2017 Mar
Journal   Genome Biol Species   Homo sapiens
Disease Type   Autism spectrum disorder Technology   Next Generation Sequencing
Case Number   3 Raw Data  
Title   Defining the diverse spectrum of inversions, complex structural variation, and chromothripsis in the morbid human genome
Authors   Collins RL, Brand H, Redin CE, Hanscom C, Antolik C, Stone MR, Glessner JT, Mason T, Pregno G, Dorrani N, Mandrile G, Giachino D, Perrin D, Walsh C, Cipicchio M, Costello M, Stortchevoi A, An JY, Currall BB, Seabra CM, Ragavendran A, Margolin L, Martinez-Agosto JA, Lucente D, Levy B, Sanders SJ, Wapner RJ, Quintero-Rivera F, Kloosterman W, Talkowski ME
Affiliation   Molecular Neurogenetics Unit and Psychiatric and Neurodevelopmental Genetics Unit, Center for Genomic Medicine, and Department of Neurology, Massachusetts General Hospital, Boston, MA, 02114, USA
Chromothripsis Definition   Close-by breakpoints: >=9
Copy number states: 2
Fragments random joining: Yes
Download   Study Data File
 
Chromothripsis Cases
  TL010
     
  Case ID: TL010
  Chromosome:1,12,14,15
  Disease type: Autism spectrum disorder
  Technology: Next Generation Sequencing
  Platform: Illumina HiSeq 2000 /2500
  Affected Gene: Gene List
  Download: Copy Number File   
  UTR22
     
  Case ID: UTR22
  Chromosome:2,7,8,9
  Disease type: Autism spectrum disorder
  Technology: Next Generation Sequencing
  Platform: Illumina HiSeq 2000 /2500
  Affected Gene: Gene List
  Download: Copy Number File   
  TL009
     
  Case ID: TL009
  Chromosome:19
  Disease type: Autism spectrum disorder
  Technology: Next Generation Sequencing
  Platform: Illumina HiSeq 2000 /2500
  Affected Gene: Gene List
  Download: Copy Number File   
 
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