ChromothripsisDB: a curated database of chromothripsis
 
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  Study
PubMed ID   26993771 Publish Date   2016 Mar
Journal   Oncotarget Species   Homo sapiens
Disease Type   HPV transducted human foreskin keratinocytes cell line Technology   array CGH
Case Number   2 Raw Data   GEO: GSE72063  
Title   Immortalization capacity of HPV types is inversely related to chromosomal instability
Authors   Schutze DM, Krijgsman O, Snijders PJ, Ylstra B, Weischenfeldt J, Mardin BR, Stutz AM, Korbel JO, de Winter JP, Meijer CJ, Quint WG, Bosch L, Wilting SM, Steenbergen RD
Affiliation   Department of Pathology, VU University Medical Center, Amsterdam, The Netherlands
Chromothripsis Definition   Close-by breakpoints: >20
Copy number states: 3
Fragments random joining: No
Download   Study Data File
 
Chromothripsis Cases
  donorI_HPV16_passage40
     
  Case ID: donorI_HPV16_passage40
  Chromosome:8
  Disease type: HPV transducted human foreskin keratinocytes cell line
  Technology: Next Generation Sequencing
  Platform: Illumina HiSeq
  Affected Gene: Gene List
  donorI_HPV16_passage100
     
  Case ID: donorI_HPV16_passage100
  Chromosome:8
  Disease type: HPV transducted human foreskin keratinocytes cell line
  Technology: array CGH
  Platform: Agilent 2x105K arrayCGH
  Affected Gene: Gene List
 
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