ChromothripsisDB: a curated database of chromothripsis
 
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  Study
PubMed ID   22927308 Publish Date   2012 Dec
Journal   Genes Chromosomes Cancer Species   Homo sapiens
Disease Type   Prostate cancer Technology   Next Generation Sequencing
Case Number   3 Raw Data  
Title   Poly-gene fusion transcripts and chromothripsis in prostate cancer.
Authors   Wu C, Wyatt AW, McPherson A, Lin D, McConeghy BJ, Mo F, Shukin R, Lapuk AV, Jones SJ, Zhao Y, Marra MA, Gleave ME, Volik SV, Wang Y, Sahinalp SC, Collins CC
Affiliation   Vancouver Prostate Centre and Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada
Chromothripsis Definition   Close-by breakpoints: >=8
Copy number states: 2
Fragments random joining: NA
Download   Study Data File
 
Chromothripsis Cases
  LTL-313H
     
  Case ID: LTL-313H
  Chromosome:1,8,12
  Disease type: Prostate cancer
  Technology: Next Generation Sequencing
  Platform: Illumina Genome Analyzer II
  Affected Gene: Gene List
  LNCaP
     
  Case ID: LNCaP
  Chromosome:6,10
  Disease type: Prostate cancer
  Technology: Next Generation Sequencing
  Platform: Illumina Genome Analyzer II
  890
     
  Case ID: 890
  Chromosome:2,9
  Disease type: Prostate cancer
  Technology: Next Generation Sequencing
  Platform: Illumina Genome Analyzer II
 
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