ChromothripsisDB: a curated database of chromothripsis
 
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  Fusion Gene
  PubMed ID: 25719666 Case ID: ICGC_0242 Disease: Pancreatic cancer Genome Assembly: GRCh37/hg19
Gene Symbol 1 Chromosome1 Description 1 Gene Symbol 2 Chromosome2 Description 2
BTBD1 15 BTB (POZ) domain containing 1 MEF2A 15 myocyte enhancer factor 2A
OTUD7A 15 OTU deubiquitinase 7A SLC28A1 15 solute carrier family 28 (concentrative nucleoside transporter), member 1
 
 
  Affected Gene
  PubMed ID: 25719666 Case ID: ICGC_0242 Disease: Pancreatic cancer Genome Assembly: GRCh37/hg19
Gene Symbol Entrez Gene Chromosome Start End Description
ABHD2 11057 15 89630690 89745591 abhydrolase domain containing 2
ACAN 176 15 89346674 89418585 aggrecan
ADAMTS17 170691 15 100511794 100882210 ADAM metallopeptidase with thrombospondin type 1 motif, 17
ADAMTS7 11173 15 79051545 79103773 ADAM metallopeptidase with thrombospondin type 1 motif, 7
ADAMTSL3 57188 15 84322838 84708594 ADAMTS-like 3
AEN 64782 15 89164527 89175513 apoptosis enhancing nuclease
AKAP13 11214 15 85923802 86292586 A kinase (PRKA) anchor protein 13
ALDH1A3 220 15 101417919 101456831 aldehyde dehydrogenase 1 family, member A3
ALPK3 57538 15 85359911 85416713 alpha-kinase 3
ANKRD34C 390616 15 79575146 79590580 ankyrin repeat domain 34C
ANPEP 290 15 90328120 90358633 alanyl (membrane) aminopeptidase
AP3B2 8120 15 83328033 83378666 adaptor-related protein complex 3, beta 2 subunit
AP3S2 10239 15 90373831 90437574 adaptor-related protein complex 3, sigma 2 subunit
AP4E1 23431 15 51200869 51298097 adaptor-related protein complex 4, epsilon 1 subunit
ARNT2 9915 15 80696692 80890278 aryl-hydrocarbon receptor nuclear translocator 2
ARRDC4 91947 15 98462784 98517068 arrestin domain containing 4
ASB7 140460 15 101142739 101191910 ankyrin repeat and SOCS box containing 7
BCL2A1 597 15 80253231 80263788 BCL2-related protein A1
BTBD1 53339 15 83685174 83736106 BTB (POZ) domain containing 1
C15orf26 161502 15 81299374 81441516 chromosome 15 open reading frame 26
C15orf40 123207 15 83657193 83680393 chromosome 15 open reading frame 40
C2CD4A 145741 15 62359176 62363116 C2 calcium-dependent domain containing 4A
CERS3 204219 15 100940600 101085200 ceramide synthase 3
CHRNA3 1136 15 78885394 78913637 cholinergic receptor, nicotinic, alpha 3 (neuronal)
CHRNA5 1138 15 78857862 78887611 cholinergic receptor, nicotinic, alpha 5 (neuronal)
CHRNA7 1139 15 32322691 32464722 cholinergic receptor, nicotinic, alpha 7 (neuronal)
CHRNB4 1143 15 78916461 79020096 cholinergic receptor, nicotinic, beta 4 (neuronal)
CHSY1 22856 15 101715928 101792137 chondroitin sulfate synthase 1
CIB1 10519 15 90773207 90777279 calcium and integrin binding 1 (calmyrin)
CPEB1 64506 15 83211951 83317612 cytoplasmic polyadenylation element binding protein 1
CRTC3 64784 15 91073157 91188577 CREB regulated transcription coactivator 3
CTSH 1512 15 79213400 79241916 cathepsin H
DET1 55070 15 89054790 89089906 de-etiolated homolog 1 (Arabidopsis)
EFTUD1 79631 15 82422571 82555104 elongation factor Tu GTP binding domain containing 1
FAH 2184 15 80444832 80479288 fumarylacetoacetate hydrolase (fumarylacetoacetase)
FAM103A1 83640 15 83654959 83659809 family with sequence similarity 103, member A1
FAM154B 283726 15 82555151 82577271 family with sequence similarity 154, member B
FAM169B 283777 15 98980391 99057611 family with sequence similarity 169, member B
FANCI 55215 15 89787180 89860492 Fanconi anemia, complementation group I
FSD2 123722 15 83424114 83474822 fibronectin type III and SPRY domain containing 2
GDPGP1 390637 15 90777040 90785315 GDP-D-glucose phosphorylase 1
GOLGA6L10 647042 15 82635130 82641706 golgin A6 family-like 10
GOLGA6L9 440295 15 82722223 82731338 golgin A6 family-like 9
GOLGA8K 653125 15 32684983 32695396 golgin A8 family, member K
GOLGA8N 643699 15 32885657 32896179 golgin A8 family, member N
GOLGA8O 728047 15 32737307 32747835 golgin A8 family, member O
HAPLN3 145864 15 89420519 89438857 hyaluronan and proteoglycan link protein 3
HOMER2 9455 15 83509838 83654661 homer homolog 2 (Drosophila)
IDH2 3418 15 90626277 90645736 isocitrate dehydrogenase 2 (NADP+), mitochondrial
IGF1R 3480 15 99192200 99507759 insulin-like growth factor 1 receptor
IL16 3603 15 81451916 81605104 interleukin 16
IQGAP1 8826 15 90931450 91045475 IQ motif containing GTPase activating protein 1
IREB2 3658 15 78729773 78793798 iron-responsive element binding protein 2
ISG20 3669 15 89179384 89199714 interferon stimulated exonuclease gene 20kDa
KIAA1024 23251 15 79724858 79764632 KIAA1024
KIF7 374654 15 90152020 90198682 kinesin family member 7
LINS 55180 15 101099574 101143435 lines homolog (Drosophila)
LRRC28 123355 15 99791567 99930934 leucine rich repeat containing 28
LRRK1 79705 15 101459420 101610317 leucine-rich repeat kinase 1
LYSMD4 145748 15 100255902 100273766 LysM, putative peptidoglycan-binding, domain containing 4
MCTP2 55784 15 94774767 95023632 multiple C2 domains, transmembrane 2
MEF2A 4205 15 100017370 100256671 myocyte enhancer factor 2A
MESDC1 59274 15 81293295 81296342 mesoderm development candidate 1
MESDC2 23184 15 81239667 81282219 mesoderm development candidate 2
MESP1 55897 15 90291892 90294541 mesoderm posterior basic helix-loop-helix transcription factor 1
MESP2 145873 15 90303822 90321982 mesoderm posterior basic helix-loop-helix transcription factor 2
MEX3B 84206 15 82334119 82338482 mex-3 RNA binding family member B
MFGE8 4240 15 89441916 89456642 milk fat globule-EGF factor 8 protein
MORF4L1 10933 15 79102829 79190475 mortality factor 4 like 1
MRPL46 26589 15 89002707 89010650 mitochondrial ribosomal protein L46
MRPS11 64963 15 89010684 89022222 mitochondrial ribosomal protein S11
MTHFS 10588 15 80125927 80189721 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)
NGRN 51335 15 90808891 90816463 neugrin, neurite outgrowth associated
NMB 4828 15 85198360 85201794 neuromedin B
NPAP1 23742 15 24920541 24928593 nuclear pore associated protein 1
NR2F2 7026 15 96869167 96883492 nuclear receptor subfamily 2, group F, member 2
NTRK3 4916 15 88418230 88799999 neurotrophic tyrosine kinase, receptor, type 3
OR4F15 390649 15 102358366 102359350 olfactory receptor, family 4, subfamily F, member 15
OR4F6 390648 15 102345902 102346876 olfactory receptor, family 4, subfamily F, member 6
OTUD7A 161725 15 31775329 32162992 OTU deubiquitinase 7A
PCSK6 5046 15 101840818 102065405 proprotein convertase subtilisin/kexin type 6
PDE8A 5151 15 85523671 85682376 phosphodiesterase 8A
PEX11A 8800 15 90220995 90234014 peroxisomal biogenesis factor 11 alpha
PGPEP1L 145814 15 99511459 99551024 pyroglutamyl-peptidase I-like
PLIN1 5346 15 90207596 90222658 perilipin 1
POLG 5428 15 89859534 89878092 polymerase (DNA directed), gamma
PSMA4 5685 15 78832747 78841604 proteasome (prosome, macropain) subunit, alpha type, 4
RASGRF1 5923 15 79252289 79383115 Ras protein-specific guanine nucleotide-releasing factor 1
RHCG 51458 15 89998680 90039844 Rh family, C glycoprotein
RLBP1 6017 15 89753100 89764982 retinaldehyde binding protein 1
RPS17 6218 15 82821158 82824972 ribosomal protein S17
RPS27L 51065 15 63418071 63450220 ribosomal protein S27-like
SCG5 6447 15 32933877 32989299 secretogranin V (7B2 protein)
SEC11A 23478 15 85212775 85259947 SEC11 homolog A (S. cerevisiae)
SEMA4B 10509 15 90703836 90772911 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
SH3GL3 6457 15 84115980 84287495 SH3-domain GRB2-like 3
SLC28A1 9154 15 85427885 85518876 solute carrier family 28 (concentrative nucleoside transporter), member 1
SLCO3A1 28232 15 92396925 92715665 solute carrier organic anion transporter family, member 3A1
SNRPA1 6627 15 101821715 101835487 small nuclear ribonucleoprotein polypeptide A'
SNRPN 6638 15 25068794 25223870 small nuclear ribonucleoprotein polypeptide N
SNURF 8926 15 25200133 25223729 SNRPN upstream reading frame
SPATA8 145946 15 97326619 97328845 spermatogenesis associated 8
ST20 400410 15 80191182 80216044 suppressor of tumorigenicity 20
ST8SIA2 8128 15 92937058 93011958 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
STARD5 80765 15 81601394 81616524 StAR-related lipid transfer (START) domain containing 5
SYNM 23336 15 99638420 99675798 synemin, intermediate filament protein
TARSL2 123283 15 102193801 102264807 threonyl-tRNA synthetase-like 2
TICRR 90381 15 90118713 90174287 TOPBP1-interacting checkpoint and replication regulator
TM2D3 80213 15 102161847 102192594 TM2 domain containing 3
TMC3 342125 15 81623558 81666554 transmembrane channel-like 3
TMED3 23423 15 79603404 79704334 transmembrane emp24 protein transport domain containing 3
TTC23 64927 15 99676528 99791428 tetratricopeptide repeat domain 23
VIMP 55829 15 101811022 101817705 VCP-interacting membrane protein
VPS13C 54832 15 62144588 62352672 vacuolar protein sorting 13 homolog C (S. cerevisiae)
WDR73 84942 15 85185999 85197574 WD repeat domain 73
WDR93 56964 15 90234028 90286869 WD repeat domain 93
WHAMM 123720 15 83478380 83503611 WAS protein homolog associated with actin, golgi membranes and microtubules
ZFAND6 54469 15 80351910 80430735 zinc finger, AN1-type domain 6
ZNF592 9640 15 85291866 85349659 zinc finger protein 592
ZNF710 374655 15 90544624 90625438 zinc finger protein 710
ZNF774 342132 15 90895477 90909324 zinc finger protein 774
ZSCAN2 54993 15 85144217 85171027 zinc finger and SCAN domain containing 2
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Chromothripsis database. 2025 Cai Laboratory