ChromothripsisDB: a curated database of chromothripsis
 
Home Search Browse Download Tutorial Contact  
  Fusion Gene
  PubMed ID: 21892161 Case ID: CRC-6 Disease: Colorectal cancer Genome Assembly: GRCh37/hg19
Gene Symbol 1 Chromosome1 Description 1 Gene Symbol 2 Chromosome2 Description 2
APEX2 X APEX nuclease (apurinic/apyrimidinic endonuclease) 2 STAG2 X stromal antigen 2
CCDC22 X coiled-coil domain containing 22 DACH2 X dachshund family transcription factor 2
IL1RAPL1 X interleukin 1 receptor accessory protein-like 1 STAG2 X stromal antigen 2
OPHN1 X oligophrenin 1 STAG2 X stromal antigen 2
RGMB 5 repulsive guidance molecule family member b ZFP91 11 ZFP91 zinc finger protein
TEX11 X testis expressed 11 SPANXN3 X SPANX family, member N3
TMED7 5 transmembrane emp24 protein transport domain containing 7 GRAMD3 5 GRAM domain containing 3
 
 
  Affected Gene
  PubMed ID: 21892161 Case ID: CRC-6 Disease: Colorectal cancer Genome Assembly: GRCh37/hg19
Gene Symbol Entrez Gene Chromosome Start End Description
AGTR2 186 X 116170705 116174972 angiotensin II receptor, type 2
ALG13 79868 X 111680742 111764164 ALG13, UDP-N-acetylglucosaminyltransferase subunit
APEX2 27301 X 55000323 55007873 APEX nuclease (apurinic/apyrimidinic endonuclease) 2
BRWD3 254065 X 80669488 80809734 bromodomain and WD repeat domain containing 3
CACNA1F 778 X 49205063 49233671 calcium channel, voltage-dependent, L type, alpha 1F subunit
CCDC120 90060 X 49053432 49069858 coiled-coil domain containing 120
CCDC22 28952 X 49235467 49250526 coiled-coil domain containing 22
CEP120 153241 5 122680579 122759286 centrosomal protein 120kDa
CHD1 1105 5 98190908 98262240 chromodomain helicase DNA binding protein 1
COL4A5 1287 X 108439736 108697545 collagen, type IV, alpha 5
CSNK1G3 1456 5 122847793 122952739 casein kinase 1, gamma 3
DACH2 117154 X 86148451 86832602 dachshund family transcription factor 2
DCAF12L2 340578 X 126163499 126166097 DDB1 and CUL4 associated factor 12-like 2
EBF1 1879 5 158122928 158526769 early B-cell factor 1
EDA2R 60401 X 66594384 66639298 ectodysplasin A2 receptor
ERAP2 64167 5 96211643 96255420 endoplasmic reticulum aminopeptidase 2
FSTL4 23105 5 132532147 132948255 follistatin-like 4
GRAMD3 65983 5 125695824 125832186 GRAM domain containing 3
HRASLS5 117245 11 63228876 63258666 HRAS-like suppressor family, member 5
HSD17B10 3028 X 53431258 53434376 hydroxysteroid (17-beta) dehydrogenase 10
IL1RAPL1 11141 X 28587564 29956350 interleukin 1 receptor accessory protein-like 1
IL1RAPL2 26280 X 104566199 105769729 interleukin 1 receptor accessory protein-like 2
JRKL 8690 11 96123153 96240738 JRK-like
KLF8 11279 X 56232356 56291527 Kruppel-like factor 8
LARP1 23367 5 154092462 154197167 La ribonucleoprotein domain family, member 1
LPXN 9404 11 58294344 58345693 leupaxin
MAGEB18 286514 X 26138343 26140736 melanoma antigen family B18
MAGEE1 57692 X 76427653 76431353 melanoma antigen family E1
MFAP3 4238 5 153418466 153600038 microfibrillar-associated protein 3
MIR1468 100302115 X 63786002 63786087 microRNA 1468
NUDT12 83594 5 102884556 102898494 nudix (nucleoside diphosphate linked moiety X)-type motif 12
OPHN1 4983 X 68042344 68433841 oligophrenin 1
PPP1R3F 89801 X 49269829 49288095 protein phosphatase 1, regulatory subunit 3F
RGMB 285704 5 98104354 98134347 repulsive guidance molecule family member b
RIOK2 55781 5 96496571 96518964 RIO kinase 2
SESN3 143686 11 94898704 94965705 sestrin 3
SLU7 10569 5 159828648 159848718 SLU7 splicing factor homolog (S. cerevisiae)
SNX19 399979 11 130745331 130786404 sorting nexin 19
SPANXN3 139067 X 143508735 143517475 SPANX family, member N3
STAG2 10735 X 123960560 124102656 stromal antigen 2
TEX11 56159 X 70525561 70908717 testis expressed 11
TFE3 7030 X 49028726 49043517 transcription factor binding to IGHM enhancer 3
VCX 26609 X 7842262 7844143 variable charge, X-linked
ZC4H2 55906 X 64915802 65034744 zinc finger, C4H2 domain containing
ZFP91 80829 11 58346584 58388515 ZFP91 zinc finger protein
ZXDA 7789 X 57905430 57910633 zinc finger, X-linked, duplicated A
top
 
Chromothripsis database. 2025 Cai Laboratory