ChromothripsisDB: a curated database of chromothripsis
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	Fusion Gene
	PubMed ID: 21892161	Case ID: CRC-4	Disease: Colorectal cancer	Genome Assembly: GRCh37/hg19
Gene Symbol 1 Chromosome1 Description 1 Gene Symbol 2 Chromosome2 Description 2 BST1 4 bone marrow stromal cell antigen 1 CNTNAP4 16 contactin associated protein-like 4 CD38 4 CD38 molecule KCNIP4 4 Kv channel interacting protein 4 CNTNAP4 16 contactin associated protein-like 4 VAT1L 16 vesicle amine transport 1-like DOCK5 8 dedicator of cytokinesis 5 PLCB4 20 phospholipase C, beta 4 NRG1 8 neuregulin 1 PAK7 20 p21 protein (Cdc42/Rac)-activated kinase 7 NRG1 8 neuregulin 1 SLC24A3 20 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 RBPMS 8 RNA binding protein with multiple splicing SLC24A3 20 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 SLC24A3 20 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 ABHD12 20 abhydrolase domain containing 12 TACC1 8 transforming, acidic coiled-coil containing protein 1 MACROD2 20 MACRO domain containing 2 UNC5D 8 unc-5 homolog D (C. elegans) RALGAPB 20 Ral GTPase activating protein, beta subunit (non-catalytic)

	Affected Gene
	PubMed ID: 21892161	Case ID: CRC-4	Disease: Colorectal cancer	Genome Assembly: GRCh37/hg19
Gene Symbol Entrez Gene Chromosome Start End Description ABCC12 94160 16 48116884 48189929 ATP-binding cassette, sub-family C (CFTR/MRP), member 12 ABHD12 26090 20 25275379 25371619 abhydrolase domain containing 12 ACTR5 79913 20 37377085 37400834 ARP5 actin-related protein 5 homolog (yeast) ANK1 286 8 41510739 41754280 ankyrin 1, erythrocytic ASB3 51130 2 53897430 54087297 ankyrin repeat and SOCS box containing 3 BTBD3 22903 20 11871371 11907257 BTB (POZ) domain containing 3 C1QTNF7 114905 4 15341442 15447790 C1q and tumor necrosis factor related protein 7 CD38 952 4 15779898 15854853 CD38 molecule CNTNAP4 85445 16 76311176 76593135 contactin associated protein-like 4 CPEB2 132864 4 15004298 15071777 cytoplasmic polyadenylation element binding protein 2 CSRP2BP 57325 20 18118762 18169031 CSRP2 binding protein DHX35 60625 20 37590942 37668366 DEAH (Asp-Glu-Ala-His) box polypeptide 35 DOCK5 80005 8 25042238 25275598 dedicator of cytokinesis 5 DUSP4 1846 8 29190581 29208185 dual specificity phosphatase 4 FAM135B 51059 8 139142266 139509065 family with sequence similarity 135, member B FUT10 84750 8 33228342 33330940 fucosyltransferase 10 (alpha (1,3) fucosyltransferase) GBA3 57733 4 22694537 22821198 glucosidase, beta, acid 3 (gene/pseudogene) GGTLC1 92086 20 23965690 23969416 gamma-glutamyltransferase light chain 1 GOLGA7 51125 8 41347915 41368499 golgin A7 GPR125 166647 4 22346694 22517677 G protein-coupled receptor 125 HPR 3250 16 72088522 72111145 haptoglobin-related protein IDO1 3620 8 39759794 39785963 indoleamine 2,3-dioxygenase 1 INTU 27152 4 128544426 128647892 inturned planar cell polarity protein JAG1 182 20 10618332 10654694 jagged 1 KHDRBS3 10656 8 136469700 136668965 KH domain containing, RNA binding, signal transduction associated 3 LPHN3 23284 4 62066976 62944053 latrophilin 3 MACROD2 140733 20 13976015 16033842 MACRO domain containing 2 NEFL 4747 8 24808468 24814624 neurofilament, light polypeptide NKX6-3 157848 8 41502697 41508855 NK6 homeobox 3 NRG1 3084 8 31496902 32622548 neuregulin 1 OTOR 56914 20 16729003 16750707 otoraplin PAK7 57144 20 9518036 9819689 p21 protein (Cdc42/Rac)-activated kinase 7 PCSK2 5126 20 17206752 17465223 proprotein convertase subtilisin/kexin type 2 PDHA2 5161 4 96761239 96762625 pyruvate dehydrogenase (lipoamide) alpha 2 PET117 100303755 20 18118517 18123813 PET117 homolog (S. cerevisiae) PLCB4 5332 20 9049410 9461889 phospholipase C, beta 4 PNOC 5368 8 28174503 28200872 prepronociceptin PXDNL 137902 8 52232138 52722005 peroxidasin-like RALGAPB 57148 20 37101459 37207504 Ral GTPase activating protein, beta subunit (non-catalytic) RBPMS 11030 8 30241944 30429778 RNA binding protein with multiple splicing SFRP1 6422 8 41119481 41167016 secreted frizzled-related protein 1 SLC24A3 57419 20 19193290 19703581 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 SNX5 27131 20 17922241 17949623 sorting nexin 5 TACC1 6867 8 38585704 38710546 transforming, acidic coiled-coil containing protein 1 TXNL4B 54957 16 72078188 72128330 thioredoxin-like 4B UNC5D 137970 8 35092975 35654068 unc-5 homolog D (C. elegans) VAT1L 57687 16 77822427 78014004 vesicle amine transport 1-like XRN2 22803 20 21283942 21370463 5'-3' exoribonuclease 2 ZMAT4 79698 8 40388109 40755352 zinc finger, matrin-type 4 ZNF133 7692 20 18269121 18297640 zinc finger protein 133 ZNF23 7571 16 71481500 71496998 zinc finger protein 23 ZNF703 80139 8 37553269 37557537 zinc finger protein 703 top

Chromothripsis database. 2025 Cai Laboratory