ChromothripsisDB: a curated database of chromothripsis
Home			Search	Browse	Download	Tutorial	Contact

	Fusion Gene
	PubMed ID: 22622578	Case ID: ME020	Disease: Melanoma	Genome Assembly: GRCh37/hg19
Gene Symbol 1 Chromosome1 Description 1 Gene Symbol 2 Chromosome2 Description 2 CDH2 18 cadherin 2, type 1, N-cadherin (neuronal) CCDC102B 18 coiled-coil domain containing 102B DDR1 6 discoidin domain receptor tyrosine kinase 1 ATF6B 6 activating transcription factor 6 beta DSP 6 desmoplakin ATF6B 6 activating transcription factor 6 beta DSP 6 desmoplakin MAK 6 male germ cell-associated kinase DSP 6 desmoplakin NPC1 18 Niemann-Pick disease, type C1 DTNBP1 6 dystrobrevin binding protein 1 KATNAL2 18 katanin p60 subunit A-like 2 EXOC2 6 exocyst complex component 2 JARID2 6 jumonji, AT rich interactive domain 2 LY86 6 lymphocyte antigen 86 LOXHD1 18 lipoxygenase homology domains 1 NCR2 6 natural cytotoxicity triggering receptor 2 SETBP1 18 SET binding protein 1 TAF11 6 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa BTBD9 6 BTB (POZ) domain containing 9 UBR2 6 ubiquitin protein ligase E3 component n-recognin 2 SETBP1 18 SET binding protein 1 UHRF1BP1 6 UHRF1 binding protein 1 BTBD9 6 BTB (POZ) domain containing 9 WRNIP1 6 Werner helicase interacting protein 1 FHOD3 18 formin homology 2 domain containing 3

	Affected Gene
	PubMed ID: 22622578	Case ID: ME020	Disease: Melanoma	Genome Assembly: GRCh37/hg19
Gene Symbol Entrez Gene Chromosome Start End Description ACOT13 55856 6 24667263 24705293 acyl-CoA thioesterase 13 ATF6B 1388 6 32065953 32096030 activating transcription factor 6 beta ATXN1 6310 6 16299343 16761722 ataxin 1 BAI3 577 6 69345259 70099403 brain-specific angiogenesis inhibitor 3 BPHL 670 6 3118608 3153812 biphenyl hydrolase-like (serine hydrolase) BTBD9 114781 6 38136227 38607924 BTB (POZ) domain containing 9 C6orf10 10665 6 32256303 32339684 chromosome 6 open reading frame 10 C6orf132 647024 6 42068856 42110357 chromosome 6 open reading frame 132 C6orf201 404220 6 4079440 4131185 chromosome 6 open reading frame 201 C6orf52 347744 6 10671651 10695030 chromosome 6 open reading frame 52 C6orf89 221477 6 36839646 36896740 chromosome 6 open reading frame 89 C9orf72 203228 9 27546544 27573864 chromosome 9 open reading frame 72 CAP2 10486 6 17393447 17558023 CAP, adenylate cyclase-associated protein, 2 (yeast) CCDC102B 79839 18 66382446 66722426 coiled-coil domain containing 102B CD2AP 23607 6 47445525 47594999 CD2-associated protein CD83 9308 6 14117872 14137149 CD83 molecule CDH19 28513 18 64168320 64271375 cadherin 19, type 2 CDH2 1000 18 25530930 25757410 cadherin 2, type 1, N-cadherin (neuronal) CDH7 1005 18 63417488 63548638 cadherin 7, type 2 CDKN1A 1026 6 36644305 36655116 cyclin-dependent kinase inhibitor 1A (p21, Cip1) CDYL 9425 6 4706393 4955785 chromodomain protein, Y-like CELF4 56853 18 34823010 35146000 CUGBP, Elav-like family member 4 CIDEA 1149 18 12254318 12277594 cell death-inducing DFFA-like effector a CLIC5 53405 6 45868045 46048132 chloride intracellular channel 5 CPNE5 57699 6 36708552 36807778 copine V DCC 1630 18 49866542 51057784 DCC netrin 1 receptor DCDC2 51473 6 24171984 24358280 doublecortin domain containing 2 DOK6 220164 18 67068291 67516323 docking protein 6 DSC3 1825 18 28569974 28622781 desmocollin 3 DSP 1832 6 7541808 7586950 desmoplakin DST 667 6 56322785 56819426 dystonin DTNBP1 84062 6 15523032 15663289 dystrobrevin binding protein 1 EDN1 1906 6 12290596 12297427 endothelin 1 ELOVL2 54898 6 10980992 11044547 ELOVL fatty acid elongase 2 ELP2 55250 18 33709407 33757909 elongator acetyltransferase complex subunit 2 ETV7 51513 6 36322419 36356164 ets variant 7 EXOC2 55770 6 485133 693117 exocyst complex component 2 F13A1 2162 6 6144318 6321246 coagulation factor XIII, A1 polypeptide FAM50B 26240 6 3849620 3851551 family with sequence similarity 50, member B FGD2 221472 6 36973422 36996846 FYVE, RhoGEF and PH domain containing 2 FHOD3 80206 18 33877677 34360018 formin homology 2 domain containing 3 FOXP4 116113 6 41514164 41570122 forkhead box P4 FOXQ1 94234 6 1312675 1314992 forkhead box Q1 GALNT1 2589 18 33161081 33291798 polypeptide N-acetylgalactosaminyltransferase 1 GCLC 2729 6 53362139 53481768 glutamate-cysteine ligase, catalytic subunit GCNT2 2651 6 10492456 10629601 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) GFOD1 54438 6 13358062 13487894 glucose-fructose oxidoreductase domain containing 1 GJA1 2697 6 121756838 121770873 gap junction protein, alpha 1, 43kDa GMDS 2762 6 1624041 2245926 GDP-mannose 4,6-dehydratase GRM4 2914 6 33989628 34123399 glutamate receptor, metabotropic 4 GSTA4 2941 6 52842751 52860176 glutathione S-transferase alpha 4 HDGFL1 154150 6 22569678 22571892 hepatoma derived growth factor-like 1 HLA-G 3135 6 29794744 29798902 major histocompatibility complex, class I, G ID4 3400 6 19837617 19840915 inhibitor of DNA binding 4, dominant negative helix-loop-helix protein INO80C 125476 18 33032194 33077955 INO80 complex subunit C ITPR3 3710 6 33588142 33664351 inositol 1,4,5-trisphosphate receptor, type 3 JARID2 3720 6 15246527 15522252 jumonji, AT rich interactive domain 2 KATNAL2 83473 18 44497455 44627658 katanin p60 subunit A-like 2 KIAA0319 9856 6 24544332 24646383 KIAA0319 KLHL14 57565 18 30252634 30353025 kelch-like family member 14 LOXHD1 125336 18 44056935 44236996 lipoxygenase homology domains 1 LY86 9450 6 6588341 6655216 lymphocyte antigen 86 MAK 4117 6 10762956 10838764 male germ cell-associated kinase MAPK4 5596 18 48086448 48258194 mitogen-activated protein kinase 4 MBD2 8932 18 51679079 51751158 methyl-CpG binding domain protein 2 MBOAT1 154141 6 20100935 20212670 membrane bound O-acyltransferase domain containing 1 MC4R 4160 18 58038564 58040001 melanocortin 4 receptor ME2 4200 18 48405419 48474691 malic enzyme 2, NAD(+)-dependent, mitochondrial MEX3C 51320 18 48700920 48744674 mex-3 RNA binding family member C MOCOS 55034 18 33767482 33852120 molybdenum cofactor sulfurase MRO 83876 18 48324574 48351772 maestro MYLIP 29116 6 16129356 16148479 myosin regulatory light chain interacting protein MYLK4 340156 6 2663863 2751200 myosin light chain kinase family, member 4 NCR2 9436 6 41303393 41318625 natural cytotoxicity triggering receptor 2 NPC1 4864 18 21086148 21166862 Niemann-Pick disease, type C1 PGBD1 84547 6 28249314 28270326 piggyBac transposable element derived 1 PHACTR1 221692 6 12717893 13288645 phosphatase and actin regulator 1 PIK3C3 5289 18 39535171 39667794 phosphatidylinositol 3-kinase, catalytic subunit type 3 RANBP9 10048 6 13621730 13711796 RAN binding protein 9 RBM24 221662 6 17281577 17294106 RNA binding motif protein 24 RIOK1 83732 6 7389729 7418270 RIO kinase 1 RIT2 6014 18 40323192 40695657 Ras-like without CAAX 2 RNF165 494470 18 43906772 44043103 ring finger protein 165 RNF182 221687 6 13924677 13980533 ring finger protein 182 ROCK1 6093 18 18526867 18691812 Rho-associated, coiled-coil containing protein kinase 1 RREB1 6239 6 7107830 7252213 ras responsive element binding protein 1 RTTN 25914 18 67671029 67873181 rotatin SERPINB1 1992 6 2832566 2842240 serpin peptidase inhibitor, clade B (ovalbumin), member 1 SERPINB2 5055 18 61538926 61571124 serpin peptidase inhibitor, clade B (ovalbumin), member 2 SERPINB5 5268 18 61143994 61172318 serpin peptidase inhibitor, clade B (ovalbumin), member 5 SERPINB8 5271 18 61637159 61672278 serpin peptidase inhibitor, clade B (ovalbumin), member 8 SETBP1 26040 18 42260138 42648475 SET binding protein 1 SLC22A23 63027 6 3269196 3457256 solute carrier family 22, member 23 SLC35B3 51000 6 8413301 8435794 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 SMAD2 4087 18 45357922 45457515 SMAD family member 2 SOCS6 9306 18 67956137 67997436 suppressor of cytokine signaling 6 SYT4 6860 18 40847843 40857615 synaptotagmin IV TAF11 6882 6 34845555 34855866 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa TCF4 6925 18 52889562 53332018 transcription factor 4 TFAP2A 7020 6 10393419 10419892 transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) TINAG 27283 6 54172657 54254950 tubulointerstitial nephritis antigen TRERF1 55809 6 42192669 42419789 transcriptional regulating factor 1 UBR2 23304 6 42531800 42661242 ubiquitin protein ligase E3 component n-recognin 2 UHRF1BP1 54887 6 34759857 34850915 UHRF1 binding protein 1 VPS4B 9525 18 61056423 61089716 vacuolar protein sorting 4 homolog B (S. cerevisiae) WDR7 23335 18 54318574 54698828 WD repeat domain 7 WRNIP1 56897 6 2765648 2787186 Werner helicase interacting protein 1 ZBTB7C 201501 18 45553044 45937123 zinc finger and BTB domain containing 7C ZNF396 252884 18 32946661 32957301 zinc finger protein 396 ZNF407 55628 18 72265106 72777627 zinc finger protein 407 ZNF521 25925 18 22641890 22932154 zinc finger protein 521 ZSCAN23 222696 6 28399707 28411279 zinc finger and SCAN domain containing 23 top

Chromothripsis database. 2025 Cai Laboratory