ChromothripsisDB: a curated database of chromothripsis
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	Fusion Gene
	PubMed ID: 23796897	Case ID: TCGA-06-0129	Disease: Glioblastoma	Genome Assembly: GRCh37/hg19
Gene Symbol 1 Chromosome1 Description 1 Gene Symbol 2 Chromosome2 Description 2 COQ10A 12 coenzyme Q10 homolog A (S. cerevisiae) USP5 12 ubiquitin specific peptidase 5 (isopeptidase T) FGD4 12 FYVE, RhoGEF and PH domain containing 4 LRRK2 12 leucine-rich repeat kinase 2 FRS2 12 fibroblast growth factor receptor substrate 2 KIF5A 12 kinesin family member 5A GNB3 12 guanine nucleotide binding protein (G protein), beta polypeptide 3 METAP2 12 methionyl aminopeptidase 2 KIAA1033 12 KIAA1033 LGR5 12 leucine-rich repeat containing G protein-coupled receptor 5 NOC4L 12 nucleolar complex associated 4 homolog (S. cerevisiae) SDS 12 serine dehydratase PCBP2 12 poly(rC) binding protein 2 UHRF1BP1L 12 UHRF1 binding protein 1-like PPFIA2 12 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 DPY19L2 12 dpy-19-like 2 (C. elegans) SLC11A2 12 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 PFKM 12 phosphofructokinase, muscle SLC2A13 12 solute carrier family 2 (facilitated glucose transporter), member 13 ANAPC7 12 anaphase promoting complex subunit 7 TM7SF3 12 transmembrane 7 superfamily member 3 C12orf42 12 chromosome 12 open reading frame 42 UHRF1BP1 6 UHRF1 binding protein 1 EPYC 12 epiphycan YEATS4 12 YEATS domain containing 4 EP400 12 E1A binding protein p400

	Affected Gene
	PubMed ID: 23796897	Case ID: TCGA-06-0129	Disease: Glioblastoma	Genome Assembly: GRCh37/hg19
Gene Symbol Entrez Gene Chromosome Start End Description ANAPC7 51434 12 110810705 110841535 anaphase promoting complex subunit 7 C12orf42 374470 12 103631369 103889749 chromosome 12 open reading frame 42 COQ10A 93058 12 56660642 56664750 coenzyme Q10 homolog A (S. cerevisiae) DPY19L2 283417 12 63952693 64062719 dpy-19-like 2 (C. elegans) EP400 57634 12 132434508 132565005 E1A binding protein p400 EPYC 1833 12 91357456 91398803 epiphycan FGD4 121512 12 32552463 32798984 FYVE, RhoGEF and PH domain containing 4 FRS2 10818 12 69864129 69973562 fibroblast growth factor receptor substrate 2 GNB3 2784 12 6949118 6956557 guanine nucleotide binding protein (G protein), beta polypeptide 3 KIAA1033 23325 12 105501102 105562912 KIAA1033 KIF5A 3798 12 57943781 57980415 kinesin family member 5A LGR5 8549 12 71833550 71980090 leucine-rich repeat containing G protein-coupled receptor 5 LRRK2 120892 12 40590546 40763087 leucine-rich repeat kinase 2 METAP2 10988 12 95867296 95909615 methionyl aminopeptidase 2 NOC4L 79050 12 132628993 132637013 nucleolar complex associated 4 homolog (S. cerevisiae) PCBP2 5094 12 53835525 53874946 poly(rC) binding protein 2 PFKM 5213 12 48498922 48540187 phosphofructokinase, muscle PPFIA2 8499 12 81652045 82153332 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 SDS 10993 12 113830250 113864106 serine dehydratase SLC11A2 4891 12 51373184 51422349 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 SLC2A13 114134 12 40148823 40499891 solute carrier family 2 (facilitated glucose transporter), member 13 TM7SF3 51768 12 27126128 27167367 transmembrane 7 superfamily member 3 UHRF1BP1L 23074 12 100422233 100536626 UHRF1 binding protein 1-like USP5 8078 12 6961292 6975796 ubiquitin specific peptidase 5 (isopeptidase T) YEATS4 8089 12 69753483 69784576 YEATS domain containing 4 top

Chromothripsis database. 2025 Cai Laboratory