ChromothripsisDB: a curated database of chromothripsis
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	Fusion Gene
	PubMed ID: 23622249	Case ID: P05-620	Disease: Prostate cancer	Genome Assembly: GRCh37/hg19
Gene Symbol 1 Chromosome1 Description 1 Gene Symbol 2 Chromosome2 Description 2 AGL 1 amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase S1PR1 1 sphingosine-1-phosphate receptor 1 BEND5 1 BEN domain containing 5 TTC28 22 tetratricopeptide repeat domain 28 CD38 4 CD38 molecule LDB2 4 LIM domain binding 2 CLVS1 8 clavesin 1 NKAIN3 8 Na+/K+ transporting ATPase interacting 3 CNBD1 8 cyclic nucleotide binding domain containing 1 GABRG3 15 gamma-aminobutyric acid (GABA) A receptor, gamma 3 CNTNAP5 2 contactin associated protein-like 5 LRP1B 2 low density lipoprotein receptor-related protein 1B CNTNAP5 2 contactin associated protein-like 5 ZEB2 2 zinc finger E-box binding homeobox 2 CUBN 10 cubilin (intrinsic factor-cobalamin receptor) MLLT10 10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 GPR39 2 G protein-coupled receptor 39 NCKAP5 2 NCK-associated protein 5 IRAK3 12 interleukin-1 receptor-associated kinase 3 GRIP1 12 glutamate receptor interacting protein 1 IWS1 2 IWS1 homolog (S. cerevisiae) LRP1B 2 low density lipoprotein receptor-related protein 1B JAKMIP1 4 janus kinase and microtubule interacting protein 1 KCNIP4 4 Kv channel interacting protein 4 LNPEP 5 leucyl/cystinyl aminopeptidase SLCO6A1 5 solute carrier organic anion transporter family, member 6A1 LYN 8 LYN proto-oncogene, Src family tyrosine kinase CYP7B1 8 cytochrome P450, family 7, subfamily B, polypeptide 1 NKAIN2 6 Na+/K+ transporting ATPase interacting 2 SLC2A12 6 solute carrier family 2 (facilitated glucose transporter), member 12 NKAIN2 6 Na+/K+ transporting ATPase interacting 2 TBPL1 6 TBP-like 1 PARK2 6 parkin RBR E3 ubiquitin protein ligase PACRG 6 PARK2 co-regulated SERAC1 6 serine active site containing 1 PACRG 6 PARK2 co-regulated SLCO4C1 5 solute carrier organic anion transporter family, member 4C1 FNIP1 5 folliculin interacting protein 1 TMBIM4 12 transmembrane BAX inhibitor motif containing 4 GRIP1 12 glutamate receptor interacting protein 1 USP15 12 ubiquitin specific peptidase 15 GRIP1 12 glutamate receptor interacting protein 1

	Affected Gene
	PubMed ID: 23622249	Case ID: P05-620	Disease: Prostate cancer	Genome Assembly: GRCh37/hg19
Gene Symbol Entrez Gene Chromosome Start End Description AFF2 2334 X 148500619 149000663 AF4/FMR2 family, member 2 AGL 178 1 100315640 100389579 amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase AMD1 262 6 111195973 111216916 adenosylmethionine decarboxylase 1 ANKRD6 22881 6 90142889 90343553 ankyrin repeat domain 6 ARMC3 219681 10 23216953 23326518 armadillo repeat containing 3 ASCC3 10973 6 100956070 101329248 activating signal cointegrator 1 complex subunit 3 ATP10A 57194 15 25922420 26110317 ATPase, class V, type 10A BEND5 79656 1 49193195 49242641 BEN domain containing 5 CD247 919 1 167399877 167487847 CD247 molecule CD38 952 4 15779898 15854853 CD38 molecule CDC123 8872 10 12237964 12292588 cell division cycle 123 CDC14A 8556 1 100810584 100985833 cell division cycle 14A CLVS1 157807 8 61969717 62414204 clavesin 1 CNBD1 168975 8 87878670 88627447 cyclic nucleotide binding domain containing 1 CNTN5 53942 11 98891683 100229616 contactin 5 CNTNAP5 129684 2 124782864 125672864 contactin associated protein-like 5 COL22A1 169044 8 139600478 139926249 collagen, type XXII, alpha 1 CSMD1 64478 8 2792875 4852494 CUB and Sushi multiple domains 1 CTNNA2 1496 2 79412357 80875905 catenin (cadherin-associated protein), alpha 2 CUBN 8029 10 16865963 17171830 cubilin (intrinsic factor-cobalamin receptor) CYP7B1 9420 8 65500320 65711318 cytochrome P450, family 7, subfamily B, polypeptide 1 EDIL3 10085 5 83236373 83680611 EGF-like repeats and discoidin I-like domains 3 ENPP1 5167 6 132129156 132216295 ectonucleotide pyrophosphatase/phosphodiesterase 1 ENPP3 5169 6 131949582 132068553 ectonucleotide pyrophosphatase/phosphodiesterase 3 EXTL2 2135 1 101337943 101361554 exostosin-like glycosyltransferase 2 FAM19A2 338811 12 62102040 62672931 family with sequence similarity 19 (chemokine (C-C motif)-like), member A2 FGFBP1 9982 4 15937192 15940363 fibroblast growth factor binding protein 1 FNIP1 96459 5 130977407 131132710 folliculin interacting protein 1 GABRG3 2567 15 27216429 27778373 gamma-aminobutyric acid (GABA) A receptor, gamma 3 GALNTL6 442117 4 172733405 173962710 polypeptide N-acetylgalactosaminyltransferase-like 6 GLRA3 8001 4 175558065 175750465 glycine receptor, alpha 3 GPA33 10223 1 167022073 167059868 glycoprotein A33 (transmembrane) GPR39 2863 2 133174147 133404132 G protein-coupled receptor 39 GRIP1 23426 12 66741211 67197966 glutamate receptor interacting protein 1 HEY2 23493 6 126068810 126082415 hes-related family bHLH transcription factor with YRPW motif 2 HMCN1 83872 1 185703683 186160085 hemicentin 1 IRAK3 11213 12 66582659 66648402 interleukin-1 receptor-associated kinase 3 IWS1 55677 2 128193783 128284462 IWS1 homolog (S. cerevisiae) JAKMIP1 152789 4 6027926 6202318 janus kinase and microtubule interacting protein 1 KCNB2 9312 8 73449626 73850584 potassium channel, voltage gated Shab related subfamily B, member 2 KCNT2 343450 1 196194909 196578355 potassium channel, sodium activated subfamily T, member 2 KHDRBS2 202559 6 62389865 62996132 KH domain containing, RNA binding, signal transduction associated 2 LAMA2 3908 6 129204342 129837714 laminin, alpha 2 LDB2 9079 4 16503164 16900432 LIM domain binding 2 LHCGR 3973 2 48859428 48982880 luteinizing hormone/choriogonadotropin receptor LIMS2 55679 2 128395956 128439360 LIM and senescent cell antigen-like domains 2 LNPEP 4012 5 96271098 96373219 leucyl/cystinyl aminopeptidase LRP1B 53353 2 140988992 142889270 low density lipoprotein receptor-related protein 1B LYN 4067 8 56792372 56923940 LYN proto-oncogene, Src family tyrosine kinase MCC 4163 5 112357796 112824527 mutated in colorectal cancers MED23 9439 6 131895106 131949369 mediator complex subunit 23 MLLT10 8028 10 21823094 22032559 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 MON2 23041 12 62860597 62991363 MON2 homolog (S. cerevisiae) MOXD1 26002 6 132617194 132722684 monooxygenase, DBH-like 1 MRPL18 29074 6 160210844 160219468 mitochondrial ribosomal protein L18 MSRB3 253827 12 65672423 65882024 methionine sulfoxide reductase B3 MYB 4602 6 135502453 135540311 v-myb avian myeloblastosis viral oncogene homolog NCKAP5 344148 2 133429374 134326034 NCK-associated protein 5 NET1 10276 10 5454514 5500426 neuroepithelial cell transforming 1 NKAIN2 154215 6 124125286 125146803 Na+/K+ transporting ATPase interacting 2 NKAIN3 286183 8 63161150 63912211 Na+/K+ transporting ATPase interacting 3 NMT2 9397 10 15144583 15210692 N-myristoyltransferase 2 NOX4 50507 11 89057524 89322779 NADPH oxidase 4 NPY2R 4887 4 156129781 156138230 neuropeptide Y receptor Y2 OR4N4 283694 15 22382382 22383507 olfactory receptor, family 4, subfamily N, member 4 PACRG 135138 6 163148164 163736524 PARK2 co-regulated PALMD 54873 1 100111499 100160097 palmdelphin PARK2 5071 6 161768452 163148803 parkin RBR E3 ubiquitin protein ligase POU2F1 5451 1 167190066 167396582 POU class 2 homeobox 1 POU6F2 11281 7 39017598 39532694 POU class 6 homeobox 2 RPP38 10557 10 15139179 15181817 ribonuclease P/MRP 38kDa subunit RRAGD 58528 6 90074355 90121989 Ras-related GTP binding D S1PR1 1901 1 101702444 101707074 sphingosine-1-phosphate receptor 1 SERAC1 84947 6 158530536 158589312 serine active site containing 1 SLC22A3 6581 6 160769300 160876014 solute carrier family 22 (organic cation transporter), member 3 SLC2A12 154091 6 134309835 134373774 solute carrier family 2 (facilitated glucose transporter), member 12 SLCO4C1 353189 5 101569690 101632253 solute carrier organic anion transporter family, member 4C1 SLCO6A1 133482 5 101707486 101834720 solute carrier organic anion transporter family, member 6A1 SNAP91 9892 6 84262599 84419410 synaptosomal-associated protein, 91kDa SNX9 51429 6 158244296 158366109 sorting nexin 9 SORCS1 114815 10 108333421 108924292 sortilin-related VPS10 domain containing receptor 1 SQRDL 58472 15 45923346 45983492 sulfide quinone reductase-like (yeast) STOX2 56977 4 184774584 184944679 storkhead box 2 SYNJ2 8871 6 158402888 158520208 synaptojanin 2 TATDN1 83940 8 125500726 125551699 TatD DNase domain containing 1 TBPL1 9519 6 134273308 134311570 TBP-like 1 TMBIM4 51643 12 66517697 66563765 transmembrane BAX inhibitor motif containing 4 TRDN 10345 6 123537483 123958238 triadin TTC28 23331 22 28374004 29075853 tetratricopeptide repeat domain 28 USH2A 7399 1 215796236 216596738 Usher syndrome 2A (autosomal recessive, mild) USP15 9958 12 62654119 62811211 ubiquitin specific peptidase 15 XKR4 114786 8 56014949 56454613 XK, Kell blood group complex subunit-related family, member 4 ZDHHC14 79683 6 157802165 158099178 zinc finger, DHHC-type containing 14 ZDHHC20 253832 13 21950263 22033509 zinc finger, DHHC-type containing 20 ZEB1 6935 10 31607424 31818742 zinc finger E-box binding homeobox 1 ZEB2 9839 2 145141648 145282147 zinc finger E-box binding homeobox 2 ZNF292 23036 6 87862551 87973914 zinc finger protein 292 top

Chromothripsis database. 2025 Cai Laboratory