ChromothripsisDB: a curated database of chromothripsis
 
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  Fusion Gene
  PubMed ID: 25351503 Case ID: OESO_1430 Disease: Esophageal adenocarcinoma Genome Assembly: GRCh37/hg19
Gene Symbol 1 Chromosome1 Description 1 Gene Symbol 2 Chromosome2 Description 2
TRIM26 6 tripartite motif containing 26 MDC1 6 mediator of DNA-damage checkpoint 1
 
 
  Affected Gene
  PubMed ID: 25351503 Case ID: OESO_1430 Disease: Esophageal adenocarcinoma Genome Assembly: GRCh37/hg19
Gene Symbol Entrez Gene Chromosome Start End Description
GREB1L 80000 18 18822203 19105378 growth regulation by estrogen in breast cancer-like
ANK1 286 8 41510739 41754280 ankyrin 1, erythrocytic
TTC28 23331 22 28374004 29075853 tetratricopeptide repeat domain 28
NEDD9 4739 6 11183531 11382581 neural precursor cell expressed, developmentally down-regulated 9
SLC20A2 6575 8 42273993 42397069 solute carrier family 20 (phosphate transporter), member 2
FHIT 2272 3 59735036 61237133 fragile histidine triad
APBA1 320 9 72042446 72287222 amyloid beta (A4) precursor protein-binding, family A, member 1
FAM167A 83648 8 11278972 11332224 family with sequence similarity 167, member A
SMAD4 4089 18 48494410 48611415 SMAD family member 4
SSH2 85464 17 27952956 28257294 slingshot protein phosphatase 2
WWOX 51741 16 78133310 79246564 WW domain containing oxidoreductase
PTPRN2 5799 7 157331750 158380480 protein tyrosine phosphatase, receptor type, N polypeptide 2
XKR6 286046 8 10753555 11058875 XK, Kell blood group complex subunit-related family, member 6
FDFT1 2222 8 11653082 11696818 farnesyl-diphosphate farnesyltransferase 1
IKBKB 3551 8 42128820 42189973 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
SRGAP1 57522 12 64238073 64541613 SLIT-ROBO Rho GTPase activating protein 1
EGFR 1956 7 55086714 55324313 epidermal growth factor receptor
NARS2 79731 11 78147007 78285919 asparaginyl-tRNA synthetase 2, mitochondrial (putative)
BLK 640 8 11351510 11422113 BLK proto-oncogene, Src family tyrosine kinase
HOOK3 84376 8 42752075 42885682 hook microtubule-tethering protein 3
TJP2 9414 9 71736209 71870124 tight junction protein 2
TMC1 117531 9 75136717 75451267 transmembrane channel-like 1
MACROD2 140733 20 13976015 16033842 MACRO domain containing 2
GATA4 2626 8 11534468 11617511 GATA binding protein 4
KAT6A 7994 8 41786997 41909508 K(lysine) acetyltransferase 6A
TAF4B 6875 18 23805900 23971649 TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa
DSG2 1829 18 29078006 29128971 desmoglein 2
PTAR1 375743 9 72324438 72374875 protein prenyltransferase alpha subunit repeat containing 1
IMMP2L 83943 7 110303110 111202573 IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)
PARD3B 117583 2 205410516 206484886 par-3 family cell polarity regulator beta
SUMF1 285362 3 3742498 4508965 sulfatase modifying factor 1
SCAPER 49855 15 76640526 77197785 S-phase cyclin A-associated protein in the ER
DIAPH2 1730 X 96684663 97600598 diaphanous-related formin 2
PIP5K1B 8395 9 71320575 71624092 phosphatidylinositol-4-phosphate 5-kinase, type I, beta
ALDH1A1 216 9 75515578 75695358 aldehyde dehydrogenase 1 family, member A1
KIF6 221458 6 39297766 39693181 kinesin family member 6
PLXDC2 84898 10 20105168 20578785 plexin domain containing 2
TENM4 26011 11 78363876 79151992 teneurin transmembrane protein 4
RIMS2 9699 8 104512976 105268322 regulating synaptic membrane exocytosis 2
NPM1 4869 5 170814120 170838141 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
POLB 5423 8 42195972 42229326 polymerase (DNA directed), beta
BLMH 642 17 28575218 28619074 bleomycin hydrolase
ICK 22858 6 52866077 52926600 intestinal cell (MAK-like) kinase
IL23R 149233 1 67632083 67725662 interleukin 23 receptor
SOX7 83595 8 10581278 10697357 SRY (sex determining region Y)-box 7
SOX7 83595 8 10581278 10697357 SRY (sex determining region Y)-box 7
RNF144B 255488 6 18368779 18469105 ring finger protein 144B
SRGAP2 23380 1 206516200 206637783 SLIT-ROBO Rho GTPase activating protein 2
TECPR2 9895 14 102829300 102968818 tectonin beta-propeller repeat containing 2
FCHSD2 9873 11 72547790 72853306 FCH and double SH3 domains 2
TRIM2 23321 4 154073494 154260472 tripartite motif containing 2
SEMA3A 10371 7 83585093 84122040 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
FMN1 342184 15 33057747 33486897 formin 1
NTM 50863 11 131240373 132206716 neurotrimin
TOR1AIP2 163590 1 179809102 179846938 torsin A interacting protein 2
GOLT1A 127845 1 204167288 204183220 golgi transport 1A
KCNH1 3756 1 210856555 211307457 potassium channel, voltage gated eag related subfamily H, member 1
MARK2 2011 11 63606400 63678491 MAP/microtubule affinity-regulating kinase 2
ZNF90 7643 19 20188803 20237885 zinc finger protein 90
C20orf27 54976 20 3734155 3749034 chromosome 20 open reading frame 27
HUNK 30811 21 33245628 33416946 hormonally up-regulated Neu-associated kinase
CD200R1L 344807 3 112534556 112565703 CD200 receptor 1-like
TMEM170B 100113407 6 11537938 11583757 transmembrane protein 170B
FAM8A1 51439 6 17600586 17611950 family with sequence similarity 8, member A1
SYNCRIP 10492 6 86318053 86353510 synaptotagmin binding, cytoplasmic RNA interacting protein
COBL 23242 7 51083909 51384515 cordon-bleu WH2 repeat protein
VOPP1 81552 7 55503749 55640681 vesicular, overexpressed in cancer, prosurvival protein 1
CROT 54677 7 86974997 87029111 carnitine O-octanoyltransferase
CTSB 1508 8 11700033 11726957 cathepsin B
IDO1 3620 8 39759794 39785963 indoleamine 2,3-dioxygenase 1
GDA 9615 9 74729511 74872109 guanine deaminase
LAMA3 3909 18 21269407 21535030 laminin, alpha 3
RUNX1 861 21 36160098 37376965 runt-related transcription factor 1
VPS13B 157680 8 100025494 100889808 vacuolar protein sorting 13 homolog B (yeast)
CCDC67 159989 11 93063137 93171653 coiled-coil domain containing 67
CDK5RAP2 55755 9 123151147 123342448 CDK5 regulatory subunit associated protein 2
GAB2 9846 11 77926343 78129394 GRB2-associated binding protein 2
TRPM3 80036 9 73143979 74061820 transient receptor potential cation channel, subfamily M, member 3
KCNMB2 10242 3 177990720 178562217 potassium channel subfamily M regulatory beta subunit 2
RYR2 6262 1 237205505 237997288 ryanodine receptor 2 (cardiac)
KIF3B 9371 20 30865467 30922814 kinesin family member 3B
PLAT 5327 8 42032236 42065242 plasminogen activator, tissue
CHRNB3 1142 8 42552519 42592550 cholinergic receptor, nicotinic, beta 3 (neuronal)
ARHGEF10 9639 8 1772142 1906807 Rho guanine nucleotide exchange factor (GEF) 10
ASXL1 171023 20 30946155 31027122 additional sex combs like transcriptional regulator 1
NRIP1 8204 21 16333556 16437321 nuclear receptor interacting protein 1
PRUNE2 158471 9 79226292 79521003 prune homolog 2 (Drosophila)
FHOD3 80206 18 33877677 34360018 formin homology 2 domain containing 3
SGCZ 137868 8 13947373 15095848 sarcoglycan, zeta
C1orf228 339541 1 45140364 45191263 chromosome 1 open reading frame 228
NSL1 25936 1 212899495 212965124 NSL1, MIS12 kinetochore complex component
ENTPD1 953 10 97471536 97637023 ectonucleoside triphosphate diphosphohydrolase 1
GDPD5 81544 11 75145685 75236948 glycerophosphodiester phosphodiesterase domain containing 5
SYTL2 54843 11 85405267 85522184 synaptotagmin-like 2
ALKBH8 91801 11 107373452 107436472 alkB, alkylation repair homolog 8 (E. coli)
ELMOD1 55531 11 107461817 107537505 ELMO/CED-12 domain containing 1
STXBP6 29091 14 25278862 25519503 syntaxin binding protein 6 (amisyn)
PAPLN 89932 14 73704205 73741348 papilin, proteoglycan-like sulfated glycoprotein
NUMB 8650 14 73741815 73930348 numb homolog (Drosophila)
MOCOS 55034 18 33767482 33852120 molybdenum cofactor sulfurase
SYDE1 85360 19 15218214 15225799 synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
ABCA12 26154 2 215796266 216003151 ATP-binding cassette, sub-family A (ABC1), member 12
ZNF337 26152 20 25654851 25677477 zinc finger protein 337
ZNF341 84905 20 32319463 32380075 zinc finger protein 341
TMPRSS15 5651 21 19641433 19858197 transmembrane protease, serine 15
GMPR 2766 6 16238811 16295780 guanosine monophosphate reductase
CAP2 10486 6 17393447 17558023 CAP, adenylate cyclase-associated protein, 2 (yeast)
ZNF165 7718 6 28048753 28057341 zinc finger protein 165
TRIM26 7726 6 30152232 30181204 tripartite motif containing 26
MDC1 9656 6 30667584 30685666 mediator of DNA-damage checkpoint 1
ZNF680 340252 7 63980262 64023484 zinc finger protein 680
NEIL2 252969 8 11627148 11644855 nei endonuclease VIII-like 2 (E. coli)
DEFB134 613211 8 11850692 11853821 defensin, beta 134
CPQ 10404 8 97657455 98161882 carboxypeptidase Q
FXN 2395 9 71650175 71715094 frataxin
TMEM245 23731 9 111777432 111882225 transmembrane protein 245
DACH2 117154 X 86148451 86832602 dachshund family transcription factor 2
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Chromothripsis database. 2025 Cai Laboratory