ChromothripsisDB: a curated database of chromothripsis
 
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  Fusion Gene
  PubMed ID: 25545346 Case ID: VCB02 Disease: Pheochromocytomas and paragangliomas Genome Assembly: GRCh37/hg19
Gene Symbol 1 Chromosome1 Description 1 Gene Symbol 2 Chromosome2 Description 2
ADRBK1 11 adrenergic, beta, receptor kinase 1 TEAD1 11 TEA domain family member 1 (SV40 transcriptional enhancer factor)
AMBRA1 11 autophagy/beclin-1 regulator 1 LDHAL6A 11 lactate dehydrogenase A-like 6A
AMPD3 11 adenosine monophosphate deaminase 3 C11orf49 11 chromosome 11 open reading frame 49
ARCN1 11 archain 1 SLC22A18 11 solute carrier family 22, member 18
C11orf49 11 chromosome 11 open reading frame 49 AMPD3 11 adenosine monophosphate deaminase 3
CAPN1 11 calpain 1, (mu/I) large subunit SPI1 11 Spi-1 proto-oncogene
CD44 11 CD44 molecule (Indian blood group) ARHGAP42 11 Rho GTPase activating protein 42
CD44 11 CD44 molecule (Indian blood group) HYLS1 11 hydrolethalus syndrome 1
CD44 11 CD44 molecule (Indian blood group) PUS3 11 pseudouridylate synthase 3
COPB1 11 coatomer protein complex, subunit beta 1 C2CD3 11 C2 calcium-dependent domain containing 3
DAGLA 11 diacylglycerol lipase, alpha DENND5A 11 DENN/MADD domain containing 5A
DENND5A 11 DENN/MADD domain containing 5A TRAF6 11 TNF receptor-associated factor 6, E3 ubiquitin protein ligase
MADD 11 MAP-kinase activating death domain NOX4 11 NADPH oxidase 4
NELL1 11 NEL-like 1 (chicken) BARX2 11 BARX homeobox 2
NOX4 11 NADPH oxidase 4 LDLRAD3 11 low density lipoprotein receptor class A domain containing 3
PACS1 11 phosphofurin acidic cluster sorting protein 1 KIRREL3 11 kin of IRRE like 3 (Drosophila)
PDE2A 11 phosphodiesterase 2A, cGMP-stimulated ALDH3B2 11 aldehyde dehydrogenase 3 family, member B2
PSMD13 11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 SPCS2 11 signal peptidase complex subunit 2 homolog (S. cerevisiae)
 
 
  Affected Gene
  PubMed ID: 25545346 Case ID: VCB02 Disease: Pheochromocytomas and paragangliomas Genome Assembly: GRCh37/hg19
Gene Symbol Entrez Gene Chromosome Start End Description
ADRBK1 156 11 67033881 67054027 adrenergic, beta, receptor kinase 1
ALDH3B2 222 11 67429633 67448671 aldehyde dehydrogenase 3 family, member B2
AMBRA1 55626 11 46417964 46615675 autophagy/beclin-1 regulator 1
AMPD3 272 11 10329860 10529126 adenosine monophosphate deaminase 3
AP2A2 161 11 924894 1012239 adaptor-related protein complex 2, alpha 2 subunit
ARCN1 372 11 118443105 118473748 archain 1
ARHGAP42 143872 11 100558384 100862668 Rho GTPase activating protein 42
BARX2 8538 11 129245835 129322171 BARX homeobox 2
C11orf49 79096 11 46958240 47185936 chromosome 11 open reading frame 49
C2CD3 26005 11 73723763 73882255 C2 calcium-dependent domain containing 3
CAPN1 823 11 64948037 64979477 calpain 1, (mu/I) large subunit
CARS 833 11 3022152 3078843 cysteinyl-tRNA synthetase
CD44 960 11 35160417 35253949 CD44 molecule (Indian blood group)
COPB1 1315 11 14464986 14521573 coatomer protein complex, subunit beta 1
CTNND1 1500 11 57520715 57587018 catenin (cadherin-associated protein), delta 1
CWF19L2 143884 11 107197071 107328572 CWF19-like 2, cell cycle control (S. pombe)
DAGLA 747 11 61447905 61514473 diacylglycerol lipase, alpha
DENND5A 23258 11 9160372 9286937 DENN/MADD domain containing 5A
FAT3 120114 11 92085262 92629618 FAT atypical cadherin 3
FCHSD2 9873 11 72547790 72853306 FCH and double SH3 domains 2
GRIK4 2900 11 120382468 120859613 glutamate receptor, ionotropic, kainate 4
HYLS1 219844 11 125753509 125770543 hydrolethalus syndrome 1
KIRREL3 84623 11 126293254 126873355 kin of IRRE like 3 (Drosophila)
LDHAL6A 160287 11 18477371 18501147 lactate dehydrogenase A-like 6A
LDLRAD3 143458 11 35965531 36253686 low density lipoprotein receptor class A domain containing 3
MADD 8567 11 47290712 47351582 MAP-kinase activating death domain
NELL1 4745 11 20691117 21597227 NEL-like 1 (chicken)
NOX4 50507 11 89057524 89322779 NADPH oxidase 4
PACS1 55690 11 65837834 66012218 phosphofurin acidic cluster sorting protein 1
PDE2A 5138 11 72287185 72385635 phosphodiesterase 2A, cGMP-stimulated
POLR2G 5436 11 62529016 62534182 polymerase (RNA) II (DNA directed) polypeptide G
PSMD13 5719 11 236546 252983 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
PUS3 83480 11 125763381 125773116 pseudouridylate synthase 3
RAB6A 5870 11 73386683 73472182 RAB6A, member RAS oncogene family
SLC22A18 5002 11 2920951 2946476 solute carrier family 22, member 18
SPCS2 9789 11 74660292 74690076 signal peptidase complex subunit 2 homolog (S. cerevisiae)
SPI1 6688 11 47376411 47400127 Spi-1 proto-oncogene
TEAD1 7003 11 12695969 12966298 TEA domain family member 1 (SV40 transcriptional enhancer factor)
TRAF6 7189 11 36508577 36531822 TNF receptor-associated factor 6, E3 ubiquitin protein ligase
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Chromothripsis database. 2025 Cai Laboratory