ChromothripsisDB: a curated database of chromothripsis
 
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  Fusion Gene
  PubMed ID: 23991058 Case ID: NB1142 Disease: Neuroblastoma Genome Assembly: GRCh37/hg19
Gene Symbol 1 Chromosome1 Description 1 Gene Symbol 2 Chromosome2 Description 2
BCLAF1 6 BCL2-associated transcription factor 1 RDH13 19 retinol dehydrogenase 13 (all-trans/9-cis)
CLIC5 6 chloride intracellular channel 5 RDH13 19 retinol dehydrogenase 13 (all-trans/9-cis)
PBX4 19 pre-B-cell leukemia homeobox 4 CEP89 19 centrosomal protein 89kDa
PBX4 19 pre-B-cell leukemia homeobox 4 TRIM28 19 tripartite motif containing 28
WIZ 19 widely interspaced zinc finger motifs KLK1 19 kallikrein 1
 
 
  Affected Gene
  PubMed ID: 23991058 Case ID: NB1142 Disease: Neuroblastoma Genome Assembly: GRCh37/hg19
Gene Symbol Entrez Gene Chromosome Start End Description
ADARB1 104 21 46493768 46646478 adenosine deaminase, RNA-specific, B1
ADARB2 105 10 1228073 1779670 adenosine deaminase, RNA-specific, B2 (non-functional)
ADCY2 108 5 7396321 7830194 adenylate cyclase 2 (brain)
BCLAF1 9774 6 136578001 136610989 BCL2-associated transcription factor 1
BEND3 57673 6 107386386 107436473 BEN domain containing 3
C17orf67 339210 17 54869274 54916134 chromosome 17 open reading frame 67
CAMK1D 57118 10 12391481 12877545 calcium/calmodulin-dependent protein kinase ID
CASP8AP2 9994 6 90539613 90584155 caspase 8 associated protein 2
CD164 8763 6 109687717 109703762 CD164 molecule, sialomucin
CDH13 1012 16 82660408 83830204 cadherin 13
CEP89 84902 19 33369902 33462897 centrosomal protein 89kDa
CHMP2A 27243 19 59062933 59066491 charged multivesicular body protein 2A
CLIC5 53405 6 45868045 46048132 chloride intracellular channel 5
CLPS 1208 6 35762759 35765088 colipase, pancreatic
CNTLN 54875 9 17134980 17503921 centlein, centrosomal protein
CYB5R4 51167 6 84569362 84677143 cytochrome b5 reductase 4
DCDC1 341019 11 30851916 31391357 doublecortin domain containing 1
DLG1 1739 3 196769431 197026171 discs, large homolog 1 (Drosophila)
DNAJC24 120526 11 31391387 31453396 DnaJ (Hsp40) homolog, subfamily C, member 24
DNAJC8 22826 1 28525967 28559536 DnaJ (Hsp40) homolog, subfamily C, member 8
DYSF 8291 2 71680852 71913898 dysferlin
EFCAB5 374786 17 28256218 28435470 EF-hand calcium binding domain 5
EML5 161436 14 89078775 89259096 echinoderm microtubule associated protein like 5
EPS8L1 54869 19 55583388 55599291 EPS8-like 1
ESR1 2099 6 151977826 152450754 estrogen receptor 1
EYS 346007 6 64429876 66417118 eyes shut homolog (Drosophila)
EZR 7430 6 159186773 159240444 ezrin
FAM120A 23196 9 96214004 96328397 family with sequence similarity 120A
FAM63B 54629 15 59063391 59154099 family with sequence similarity 63, member B
FAT2 2196 5 150883654 150948505 FAT atypical cadherin 2
FBXL4 26235 6 99316420 99395849 F-box and leucine-rich repeat protein 4
FBXO9 26268 6 52916789 52965671 F-box protein 9
FGGY 55277 1 59762310 60233347 FGGY carbohydrate kinase domain containing
FOXO3 2309 6 108881038 109005977 forkhead box O3
GLP1R 2740 6 39016574 39055519 glucagon-like peptide 1 receptor
GON4L 54856 1 155719508 155829191 gon-4-like (C. elegans)
GTF3C6 112495 6 111279763 111289093 general transcription factor IIIC, polypeptide 6, alpha 35kDa
HIGD1A 25994 3 42798669 42846023 HIG1 hypoxia inducible domain family, member 1A
HNMT 3176 2 138721590 138773930 histamine N-methyltransferase
ICK 22858 6 52866077 52926600 intestinal cell (MAK-like) kinase
ISYNA1 51477 19 18545198 18549111 inositol-3-phosphate synthase 1
KCNQ5 56479 6 73331520 73908574 potassium channel, voltage gated KQT-like subfamily Q, member 5
KDM2B 84678 12 121866900 122018920 lysine (K)-specific demethylase 2B
KDM4C 23081 9 6720863 7175648 lysine (K)-specific demethylase 4C
KHDC1 80759 6 73951037 74020088 KH homology domain containing 1
KHDRBS2 202559 6 62389865 62996132 KH domain containing, RNA binding, signal transduction associated 2
KIF6 221458 6 39297766 39693181 kinesin family member 6
KLHL24 54800 3 183353356 183402265 kelch-like family member 24
KLK1 3816 19 51322404 51327043 kallikrein 1
LEPR 3953 1 65886248 66107242 leptin receptor
LYPD3 27076 19 43964939 43969812 LY6/PLAUR domain containing 3
MACROD2 140733 20 13976015 16033842 MACRO domain containing 2
MAP2K3 5606 17 21187984 21218552 mitogen-activated protein kinase kinase 3
MARCH1 55016 4 164445450 165305202 membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase
MEGF6 1953 1 3406484 3528059 multiple EGF-like-domains 6
MLIP 90523 6 53794780 54131078 muscular LMNA-interacting protein
MLLT3 4300 9 20341663 20622542 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
NCOA7 135112 6 126102307 126252266 nuclear receptor coactivator 7
NUP43 348995 6 150045451 150070801 nucleoporin 43kDa
OR2L13 284521 1 248100493 248264224 olfactory receptor, family 2, subfamily L, member 13
PBX4 80714 19 19672522 19729725 pre-B-cell leukemia homeobox 4
PLCB1 23236 20 8112824 8949003 phospholipase C, beta 1 (phosphoinositide-specific)
PPARD 5467 6 35310335 35395968 peroxisome proliferator-activated receptor delta
PSMC3 5702 11 47440320 47447993 proteasome (prosome, macropain) 26S subunit, ATPase, 3
QRFPR 84109 4 122250467 122302214 pyroglutamylated RFamide peptide receptor
RBMS2 5939 12 56915713 56984745 RNA binding motif, single stranded interacting protein 2
RDH13 112724 19 55550476 55582659 retinol dehydrogenase 13 (all-trans/9-cis)
RHAG 6005 6 49572871 49604552 Rh-associated glycoprotein
RUSC2 9853 9 35490124 35561895 RUN and SH3 domain containing 2
SCN3A 6328 2 165944032 166060577 sodium channel, voltage gated, type III alpha subunit
SGSM2 9905 17 2240792 2284352 small G protein signaling modulator 2
SMARCA4 6597 19 11071598 11176071 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
TCERG1L 256536 10 132890654 133109984 transcription elongation regulator 1-like
TG 7038 8 133879203 134147147 thyroglobulin
TNFSF13B 10673 13 108903588 108960832 tumor necrosis factor (ligand) superfamily, member 13b
TNNT1 7138 19 55644162 55660722 troponin T type 1 (skeletal, slow)
TRIM28 10155 19 59055458 59062089 tripartite motif containing 28
ULK1 8408 12 132379196 132407712 unc-51 like autophagy activating kinase 1
WIZ 58525 19 15532319 15560762 widely interspaced zinc finger motifs
ZNF708 7562 19 21473962 21512227 zinc finger protein 708
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© 2015 Cai Laboratory.  Last updated on 13 Mar 2018